Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC092634.1-201ENST00000366505 199 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC026310.1-201ENST00000396004 378 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 FDPSP5-201ENST00000399474 1057 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AL353133.1-201ENST00000407695 401 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 RANP6-201ENST00000413691 644 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 CDC42P6-201ENST00000421246 576 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 SPATA20P1-201ENST00000423089 438 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 PSMD8P1-201ENST00000436275 769 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC234771.4-201ENST00000441416 730 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AL121578.2-201ENST00000448797 447 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AL356157.1-201ENST00000456722 732 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AKR1D1P1-201ENST00000457236 936 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC099340.1-201ENST00000475247 599 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 RPS4XP17-201ENST00000479057 754 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC005699.1-204ENST00000509244 747 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 IGHV3-57-201ENST00000520143 280 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC011603.2-202ENST00000552893 504 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AL139041.1-201ENST00000605480 610 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 U91328.4-201ENST00000608919 517 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC012653.2-201ENST00000621880 420 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 OR51B2-201ENST00000624187 939 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC061999.1-201ENST00000624454 177 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 LINC01616-201ENST00000561816 2280 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC027279.4-201ENST00000624371 2072 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 CASC19-228ENST00000641414 1684 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 AL731532.1-201ENST00000623972 4236 ntBASIC5.79□□□□□ -1.48
TMEM53Q6P2H8 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 SERHL2-204ENST00000407614 521 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 MIR1266-201ENST00000408125 84 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 RNA5SP155-201ENST00000411154 129 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AL139415.1-201ENST00000424862 352 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 BX276092.6-201ENST00000430476 250 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 FTLP19-201ENST00000433300 394 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC092106.2-201ENST00000436597 487 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 NPM1P23-201ENST00000440193 849 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 RPL31P11-202ENST00000454082 372 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 BX276092.8-201ENST00000455722 250 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 NREP-217ENST00000509025 987 ntTSL 3 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC008443.6-204ENST00000511517 738 ntTSL 2 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 OR4C49P-201ENST00000563891 900 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC027796.1-201ENST00000575593 512 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 RN7SL208P-201ENST00000577964 296 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC036176.3-201ENST00000602456 418 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AL078623.1-201ENST00000602702 907 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 AC022001.1-201ENST00000605193 268 ntBASIC5.78□□□□□ -1.48
TMEM53Q6P2H8 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms