Protein–RNA interactions for Protein: Q502W7

CCDC38, Coiled-coil domain-containing protein 38, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38Q502W7 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC38Q502W7 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC38Q502W7 BTK-209ENST00000618050 2417 ntTSL 5 BASIC6.69□□□□□ -1.34
CCDC38Q502W7 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC38Q502W7 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
CCDC38Q502W7 AC126474.2-201ENST00000623268 1750 ntBASIC6.69□□□□□ -1.34
CCDC38Q502W7 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC6.69□□□□□ -1.34
CCDC38Q502W7 AC092701.1-201ENST00000623627 1551 ntBASIC6.69□□□□□ -1.34
CCDC38Q502W7 AC074141.1-201ENST00000588129 2995 ntBASIC6.69□□□□□ -1.34
CCDC38Q502W7 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
CCDC38Q502W7 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC38Q502W7 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC38Q502W7 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC092111.2-201ENST00000611627 1414 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC110373.1-201ENST00000505994 3505 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC38Q502W7 TRAV27-201ENST00000390457 425 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 RN7SKP91-201ENST00000410852 288 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 RPLP1P10-201ENST00000413972 339 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 MTCO1P45-201ENST00000431457 267 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 RPS10P14-201ENST00000440748 502 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC38Q502W7 RPL36AP55-201ENST00000454114 305 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC022415.1-202ENST00000486612 523 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC097451.1-201ENST00000507388 653 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 OR52H2P-201ENST00000514607 902 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC018682.2-201ENST00000517716 399 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 PVT1-214ENST00000522875 922 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 OR8K2P-201ENST00000524645 927 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC130366.1-201ENST00000526505 1192 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC023080.1-201ENST00000551663 931 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AP003115.1-201ENST00000569849 463 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AL049840.5-201ENST00000602827 552 ntBASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC38Q502W7 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.68□□□□□ -1.34
CCDC38Q502W7 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC38Q502W7 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
CCDC38Q502W7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC011815.2-201ENST00000618230 2021 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC38Q502W7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC38Q502W7 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
CCDC38Q502W7 SNORD8-201ENST00000363915 110 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 RNU1-59P-201ENST00000364829 162 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 U3.23-201ENST00000391132 200 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 NPM1P37-201ENST00000403105 874 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 MRPL32P1-201ENST00000406301 247 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 TRBV29OR9-2-201ENST00000427589 333 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC083855.1-201ENST00000440041 258 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 SNRPBP1-201ENST00000443634 282 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AL133480.2-201ENST00000456723 487 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 RPL37AP8-201ENST00000494116 276 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC093878.1-201ENST00000515630 432 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 CNIH1-205ENST00000556113 523 ntAPPRIS ALT1 TSL 2 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC010287.1-201ENST00000566916 357 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC010139.1-201ENST00000596963 445 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 RNU6-84P-201ENST00000607737 102 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 U1.25-201ENST00000614085 162 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 U1.34-201ENST00000618578 162 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 U1.31-201ENST00000620022 160 ntBASIC6.67□□□□□ -1.34
CCDC38Q502W7 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.67□□□□□ -1.34
CCDC38Q502W7 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms