Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC7.19□□□□□ -1.26
GABPAQ06546 RN7SL221P-201ENST00000466190 281 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 OR2A1-AS1-202ENST00000467944 422 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 PSMA2P2-201ENST00000504319 686 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 AC022826.1-201ENST00000519383 805 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
GABPAQ06546 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC7.19□□□□□ -1.26
GABPAQ06546 AL355480.1-201ENST00000629041 99 ntBASIC7.19□□□□□ -1.26
GABPAQ06546 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC7.19□□□□□ -1.26
GABPAQ06546 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC7.19□□□□□ -1.26
GABPAQ06546 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
GABPAQ06546 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
GABPAQ06546 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC7.19□□□□□ -1.26
GABPAQ06546 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.19□□□□□ -1.26
GABPAQ06546 NBPF9-206ENST00000613969 4624 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
GABPAQ06546 RALBP1-206ENST00000609094 3676 ntTSL 2 BASIC7.19□□□□□ -1.26
GABPAQ06546 RBPJP7-201ENST00000442803 1447 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 RBPJP5-201ENST00000449433 1447 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 AL359091.1-201ENST00000449048 1734 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
GABPAQ06546 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC7.18□□□□□ -1.26
GABPAQ06546 GNL2P1-201ENST00000451274 2190 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 PPCS-201ENST00000372556 984 ntTSL 2 BASIC7.18□□□□□ -1.26
GABPAQ06546 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 AC092642.1-201ENST00000392417 425 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 RPS7P8-201ENST00000418311 581 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 RPL12P12-201ENST00000424633 501 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 MTND6P12-201ENST00000428247 522 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC7.18□□□□□ -1.26
GABPAQ06546 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC7.18□□□□□ -1.26
GABPAQ06546 AC011476.1-201ENST00000466725 307 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 AC114781.3-201ENST00000512083 142 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC7.18□□□□□ -1.26
GABPAQ06546 AP005639.1-201ENST00000526939 192 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 AP000648.1-201ENST00000529682 397 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC7.18□□□□□ -1.26
GABPAQ06546 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC7.18□□□□□ -1.26
GABPAQ06546 AL031601.1-201ENST00000605702 394 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC7.18□□□□□ -1.26
GABPAQ06546 AL136131.3-201ENST00000607600 188 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 AC026124.2-201ENST00000621847 656 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC7.18□□□□□ -1.26
GABPAQ06546 AL034408.1-201ENST00000637712 664 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 5S_rRNA.28-201ENST00000638107 119 ntBASIC7.18□□□□□ -1.26
GABPAQ06546 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC7.18□□□□□ -1.26
GABPAQ06546 KCNMB2-204ENST00000432997 2552 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC7.18□□□□□ -1.26
GABPAQ06546 MAK-202ENST00000354489 3941 ntTSL 5 BASIC7.18□□□□□ -1.26
GABPAQ06546 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC7.18□□□□□ -1.26
GABPAQ06546 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
GABPAQ06546 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
GABPAQ06546 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 SUPT20H-224ENST00000542180 2478 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
GABPAQ06546 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
GABPAQ06546 LINC01616-201ENST00000561816 2280 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.17□□□□□ -1.26
GABPAQ06546 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 GAS1RR-201ENST00000415801 4387 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 AL359195.2-201ENST00000623657 4412 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.17□□□□□ -1.26
GABPAQ06546 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC7.17□□□□□ -1.26
GABPAQ06546 AL031985.1-201ENST00000392713 418 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC7.17□□□□□ -1.26
GABPAQ06546 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC7.17□□□□□ -1.26
GABPAQ06546 OR13K1P-201ENST00000444577 975 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 AC016027.4-201ENST00000450866 277 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 AC103563.5-201ENST00000455643 364 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 AC017007.3-201ENST00000479865 435 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 SNORD46.2-201ENST00000516021 102 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.17□□□□□ -1.26
GABPAQ06546 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC7.17□□□□□ -1.26
GABPAQ06546 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.17□□□□□ -1.26
GABPAQ06546 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC7.17□□□□□ -1.26
GABPAQ06546 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC7.17□□□□□ -1.26
GABPAQ06546 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC7.17□□□□□ -1.26
GABPAQ06546 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC7.17□□□□□ -1.26
GABPAQ06546 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC7.17□□□□□ -1.26
GABPAQ06546 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC7.17□□□□□ -1.26
GABPAQ06546 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 AL589935.2-201ENST00000616471 1231 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
GABPAQ06546 AC003992.1-201ENST00000635364 557 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 AC112243.1-201ENST00000623949 3851 ntBASIC7.17□□□□□ -1.26
GABPAQ06546 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
GABPAQ06546 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms