Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC4.79□□□□□ -1.64
HIST1H1AQ02539 AC004158.1-201ENST00000564508 4319 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC092692.1-201ENST00000623625 2595 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 MTRNR2L8-201ENST00000536684 1303 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC245100.4-202ENST00000634638 1342 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 BIN2P1-201ENST00000504996 1530 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 RN7SKP81-201ENST00000365603 331 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 RNA5SP231-201ENST00000410496 138 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 NFU1P1-201ENST00000413128 774 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AL157884.1-201ENST00000424561 454 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC092651.1-201ENST00000426110 312 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 E2F6P1-201ENST00000428850 745 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 RPL12P16-201ENST00000431098 498 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 E2F6P3-201ENST00000441743 743 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AL354953.1-201ENST00000457852 479 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 RN7SL221P-201ENST00000466190 281 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 RPS3AP49-201ENST00000472161 790 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC022730.1-201ENST00000473114 568 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC009567.2-201ENST00000502989 349 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC068721.1-201ENST00000507156 583 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 RNA5SP400-201ENST00000517155 111 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 CHEK2P2-201ENST00000554701 672 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 SYPL1P2-201ENST00000582878 727 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC090616.1-201ENST00000583895 447 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 OR51C1P-201ENST00000608504 942 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC022726.2-201ENST00000634673 547 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC125238.2-201ENST00000430003 1440 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 AC116158.1-201ENST00000560231 2129 ntBASIC4.78□□□□□ -1.64
HIST1H1AQ02539 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
HIST1H1AQ02539 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 TLR2-201ENST00000260010 4200 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 SNORD16-201ENST00000362803 99 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 MRPS6P2-201ENST00000381143 370 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AL121835.1-201ENST00000404250 354 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AL353133.1-201ENST00000407695 401 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 RN7SKP281-201ENST00000410472 352 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC007562.1-201ENST00000421819 517 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 RPL12P18-201ENST00000437175 325 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC023274.2-201ENST00000445264 521 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AC092967.1-201ENST00000449016 481 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
HIST1H1AQ02539 VPS25P1-201ENST00000455691 508 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AL354872.1-201ENST00000456361 967 ntBASIC4.77□□□□□ -1.65
HIST1H1AQ02539 AL022319.1-201ENST00000458183 1167 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms