Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 AC018797.1-201ENST00000510791 255 ntBASIC5.43□□□□□ -1.54
UBA52P62987 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.43□□□□□ -1.54
UBA52P62987 OR4A40P-201ENST00000533878 948 ntBASIC5.43□□□□□ -1.54
UBA52P62987 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UBA52P62987 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.43□□□□□ -1.54
UBA52P62987 AC140063.1-201ENST00000541343 259 ntBASIC5.43□□□□□ -1.54
UBA52P62987 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.43□□□□□ -1.54
UBA52P62987 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC5.43□□□□□ -1.54
UBA52P62987 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC5.43□□□□□ -1.54
UBA52P62987 OR1E3-201ENST00000575608 948 ntBASIC5.43□□□□□ -1.54
UBA52P62987 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
UBA52P62987 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
UBA52P62987 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.43□□□□□ -1.54
UBA52P62987 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.43□□□□□ -1.54
UBA52P62987 AC079315.1-201ENST00000602952 623 ntBASIC5.43□□□□□ -1.54
UBA52P62987 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC5.43□□□□□ -1.54
UBA52P62987 AP000577.1-201ENST00000624366 878 ntBASIC5.43□□□□□ -1.54
UBA52P62987 AC061999.1-201ENST00000624454 177 ntBASIC5.43□□□□□ -1.54
UBA52P62987 AL035425.4-201ENST00000624509 1063 ntBASIC5.43□□□□□ -1.54
UBA52P62987 AL161912.4-201ENST00000623889 2468 ntBASIC5.43□□□□□ -1.54
UBA52P62987 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
UBA52P62987 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
UBA52P62987 KYNUP3-201ENST00000574386 1341 ntBASIC5.43□□□□□ -1.54
UBA52P62987 KCNJ16-205ENST00000586462 1897 ntTSL 5 BASIC5.43□□□□□ -1.54
UBA52P62987 LINC01613-201ENST00000561476 2780 ntBASIC5.43□□□□□ -1.54
UBA52P62987 AC024651.2-201ENST00000562480 2098 ntBASIC5.43□□□□□ -1.54
UBA52P62987 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.43□□□□□ -1.54
UBA52P62987 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.42□□□□□ -1.54
UBA52P62987 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 RNA5SP321-201ENST00000362722 111 ntBASIC5.42□□□□□ -1.54
UBA52P62987 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
UBA52P62987 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC5.42□□□□□ -1.54
UBA52P62987 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC5.42□□□□□ -1.54
UBA52P62987 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.42□□□□□ -1.54
UBA52P62987 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.42□□□□□ -1.54
UBA52P62987 AC009227.2-201ENST00000432599 511 ntTSL 3 BASIC5.42□□□□□ -1.54
UBA52P62987 ARMC4P1-201ENST00000438905 707 ntBASIC5.42□□□□□ -1.54
UBA52P62987 AC114812.2-201ENST00000439336 663 ntTSL 2 BASIC5.42□□□□□ -1.54
UBA52P62987 RPL23AP28-201ENST00000448062 470 ntBASIC5.42□□□□□ -1.54
UBA52P62987 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.42□□□□□ -1.54
UBA52P62987 VN1R38P-201ENST00000450265 887 ntBASIC5.42□□□□□ -1.54
UBA52P62987 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.42□□□□□ -1.54
UBA52P62987 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.42□□□□□ -1.54
UBA52P62987 AC021146.11-201ENST00000503319 491 ntBASIC5.42□□□□□ -1.54
UBA52P62987 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
UBA52P62987 AC112484.3-201ENST00000505910 329 ntBASIC5.42□□□□□ -1.54
UBA52P62987 AC091849.1-201ENST00000509920 121 ntBASIC5.42□□□□□ -1.54
UBA52P62987 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC5.42□□□□□ -1.54
UBA52P62987 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 AC103718.1-201ENST00000522667 683 ntTSL 3 BASIC5.42□□□□□ -1.54
UBA52P62987 AC022973.4-201ENST00000524100 917 ntTSL 2 BASIC5.42□□□□□ -1.54
UBA52P62987 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 AC084121.1-201ENST00000533882 835 ntBASIC5.42□□□□□ -1.54
UBA52P62987 AC090651.1-201ENST00000567865 634 ntBASIC5.42□□□□□ -1.54
UBA52P62987 AC233702.7-202ENST00000582941 211 ntBASIC5.42□□□□□ -1.54
UBA52P62987 AP001357.1-201ENST00000586304 1053 ntBASIC5.42□□□□□ -1.54
UBA52P62987 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
UBA52P62987 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.42□□□□□ -1.54
UBA52P62987 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.42□□□□□ -1.54
UBA52P62987 MIR6721-201ENST00000617181 87 ntBASIC5.42□□□□□ -1.54
UBA52P62987 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.42□□□□□ -1.54
UBA52P62987 AC063952.1-203ENST00000634410 658 ntBASIC5.42□□□□□ -1.54
UBA52P62987 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC5.42□□□□□ -1.54
UBA52P62987 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC5.42□□□□□ -1.54
UBA52P62987 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.42□□□□□ -1.54
UBA52P62987 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.42□□□□□ -1.54
UBA52P62987 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
UBA52P62987 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.41□□□□□ -1.54
UBA52P62987 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
UBA52P62987 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.41□□□□□ -1.54
UBA52P62987 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
UBA52P62987 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
UBA52P62987 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
UBA52P62987 RNA5SP485-201ENST00000365053 119 ntBASIC5.41□□□□□ -1.54
UBA52P62987 RNA5SP279-201ENST00000365513 117 ntBASIC5.41□□□□□ -1.54
UBA52P62987 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.41□□□□□ -1.54
UBA52P62987 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UBA52P62987 AL360013.1-201ENST00000419031 858 ntBASIC5.41□□□□□ -1.54
UBA52P62987 VTI1BP4-201ENST00000427516 527 ntBASIC5.41□□□□□ -1.54
UBA52P62987 PAICSP2-201ENST00000429118 1150 ntBASIC5.41□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 70.5 ms