Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.12□□□□□ -1.59
SPCS3P61009 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.12□□□□□ -1.59
SPCS3P61009 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC5.12□□□□□ -1.59
SPCS3P61009 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
SPCS3P61009 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SPCS3P61009 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
SPCS3P61009 ZNF705B-201ENST00000400120 1207 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SPCS3P61009 AL121835.1-201ENST00000404250 354 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 RN7SKP129-201ENST00000410288 299 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 RANP6-201ENST00000413691 644 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 AHCYP8-201ENST00000425108 209 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 PQLC2L-202ENST00000426338 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 CHCHD4P5-201ENST00000436684 427 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 PCMTD1P3-201ENST00000451824 472 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.12□□□□□ -1.59
SPCS3P61009 CBX5P1-201ENST00000468470 561 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 RPL5P15-201ENST00000475870 897 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.12□□□□□ -1.59
SPCS3P61009 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.12□□□□□ -1.59
SPCS3P61009 RNA5SP400-201ENST00000517155 111 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.12□□□□□ -1.59
SPCS3P61009 COX6B1P4-201ENST00000519826 484 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.12□□□□□ -1.59
SPCS3P61009 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 WBP2NL-210ENST00000543212 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC5.12□□□□□ -1.59
SPCS3P61009 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC5.12□□□□□ -1.59
SPCS3P61009 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.12□□□□□ -1.59
SPCS3P61009 AC126323.4-201ENST00000566935 234 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC5.12□□□□□ -1.59
SPCS3P61009 AC107993.1-201ENST00000591343 684 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC5.12□□□□□ -1.59
SPCS3P61009 MIR6085-201ENST00000618314 110 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC5.12□□□□□ -1.59
SPCS3P61009 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC5.12□□□□□ -1.59
SPCS3P61009 AL009031.1-202ENST00000632370 886 ntTSL 3 BASIC5.12□□□□□ -1.59
SPCS3P61009 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 CCNT2P1-201ENST00000423082 1315 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 PPEF1-201ENST00000349874 2687 ntTSL 5 BASIC5.12□□□□□ -1.59
SPCS3P61009 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
SPCS3P61009 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 MTND5P12-201ENST00000502851 1449 ntBASIC5.12□□□□□ -1.59
SPCS3P61009 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.12□□□□□ -1.59
SPCS3P61009 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
SPCS3P61009 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
SPCS3P61009 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
SPCS3P61009 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.11□□□□□ -1.59
SPCS3P61009 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.11□□□□□ -1.59
SPCS3P61009 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC5.11□□□□□ -1.59
SPCS3P61009 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC5.11□□□□□ -1.59
SPCS3P61009 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC5.11□□□□□ -1.59
SPCS3P61009 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.11□□□□□ -1.59
SPCS3P61009 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 RN7SKP74-201ENST00000362849 309 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 RNU1-146P-201ENST00000364015 165 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 MRPS6P2-201ENST00000381143 370 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 AL590635.1-201ENST00000406314 586 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.11□□□□□ -1.59
SPCS3P61009 RN7SKP91-201ENST00000410852 288 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.11□□□□□ -1.59
SPCS3P61009 FNDC3B-205ENST00000423424 408 ntTSL 3 BASIC5.11□□□□□ -1.59
SPCS3P61009 AC016027.5-201ENST00000427227 210 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 VPS25P1-201ENST00000455691 508 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 UOX-201ENST00000471089 899 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 AF305872.1-201ENST00000485217 471 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC5.11□□□□□ -1.59
SPCS3P61009 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC5.11□□□□□ -1.59
SPCS3P61009 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
SPCS3P61009 RFPL4AP5-201ENST00000514977 504 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.11□□□□□ -1.59
SPCS3P61009 VDAC2P2-201ENST00000544463 901 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 LINC01146-203ENST00000555996 459 ntTSL 2 BASIC5.11□□□□□ -1.59
SPCS3P61009 SETP1-201ENST00000556014 845 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC5.11□□□□□ -1.59
SPCS3P61009 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.11□□□□□ -1.59
SPCS3P61009 AL008723.3-201ENST00000608926 449 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 TP53TG1_2.1-201ENST00000611226 182 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC5.11□□□□□ -1.59
SPCS3P61009 AC007347.2-201ENST00000623044 180 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 TMEM30CP-203ENST00000637814 1035 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 AC125238.2-201ENST00000430003 1440 ntBASIC5.11□□□□□ -1.59
SPCS3P61009 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
SPCS3P61009 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms