Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 LRTOMT-209ENST00000440313 253 ntTSL 3 BASIC6.11□□□□□ -1.43
SUMO3P55854 RPS27P5-201ENST00000444247 244 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.11□□□□□ -1.43
SUMO3P55854 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC6.11□□□□□ -1.43
SUMO3P55854 AC022080.2-201ENST00000452932 533 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 OFD1P3Y-201ENST00000453312 783 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 RPL26P30-201ENST00000453533 435 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 RN7SL561P-201ENST00000488553 281 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 AC139713.1-202ENST00000512366 460 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.11□□□□□ -1.43
SUMO3P55854 AC084851.2-201ENST00000530377 364 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.11□□□□□ -1.43
SUMO3P55854 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 DUX4L52-201ENST00000549363 777 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 AL161757.5-202ENST00000556696 570 ntTSL 3 BASIC6.11□□□□□ -1.43
SUMO3P55854 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AC112503.1-201ENST00000608436 391 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 AL121652.1-201ENST00000608851 448 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 AC006328.2-201ENST00000623198 397 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AC012005.2-201ENST00000624333 397 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AC005858.3-201ENST00000624756 589 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC6.11□□□□□ -1.43
SUMO3P55854 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 NRXN1-248ENST00000636345 3595 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SUMO3P55854 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SUMO3P55854 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 RORA-201ENST00000261523 1951 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 SULF1-201ENST00000260128 5710 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 B3GNT5-206ENST00000465010 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 AL359195.2-201ENST00000623657 4412 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC007012.2-201ENST00000623206 1676 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 NXF2B-205ENST00000618881 3193 ntTSL 2 BASIC6.1□□□□□ -1.43
SUMO3P55854 ACACA-240ENST00000617649 7912 ntTSL 5 BASIC6.1□□□□□ -1.43
SUMO3P55854 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 LCP2-206ENST00000521416 1599 ntTSL 2 BASIC6.1□□□□□ -1.43
SUMO3P55854 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 PIRT-201ENST00000580256 3810 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
SUMO3P55854 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.1□□□□□ -1.43
SUMO3P55854 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC6.1□□□□□ -1.43
SUMO3P55854 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SUMO3P55854 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
SUMO3P55854 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 SPP2-201ENST00000168148 1024 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 RNU6-468P-201ENST00000384003 109 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 RNU6-796P-201ENST00000391086 107 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 RPA2P2-201ENST00000419698 796 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 PTPN2P1-201ENST00000423212 1072 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC6.1□□□□□ -1.43
SUMO3P55854 RNASE9-203ENST00000429244 1084 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC023512.1-201ENST00000444513 499 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 AC044797.1-201ENST00000445744 679 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC6.1□□□□□ -1.43
SUMO3P55854 RPL21P47-201ENST00000483696 477 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 AC063943.2-201ENST00000495697 534 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC133963.2-201ENST00000513686 578 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 MINOS1P4-201ENST00000515470 318 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC6.1□□□□□ -1.43
SUMO3P55854 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC010376.1-201ENST00000522101 334 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.1□□□□□ -1.43
SUMO3P55854 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC6.1□□□□□ -1.43
SUMO3P55854 OR7E13P-201ENST00000526052 910 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 AC007068.2-201ENST00000543168 395 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SUMO3P55854 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.1□□□□□ -1.43
SUMO3P55854 AC011921.2-201ENST00000589465 152 ntBASIC6.1□□□□□ -1.43
SUMO3P55854 AC011492.1-201ENST00000600023 315 ntBASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 105.9 ms