Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 RPL12P16-201ENST00000431098 498 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 IGLV3-4-201ENST00000432300 244 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 AC112492.2-201ENST00000432774 1030 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 OR2L9P-201ENST00000444456 913 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 AL445991.1-201ENST00000450381 475 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 RN7SL352P-201ENST00000466002 277 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 GM2AP2-201ENST00000491764 562 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 CYCSP25-201ENST00000525280 316 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 AC092865.1-201ENST00000544395 1023 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.99□□□□□ -1.45
PKNOX1P55347 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 MIR132-201ENST00000591554 101 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 AL591222.2-201ENST00000604443 754 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 MIR6811-201ENST00000620409 58 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC5.99□□□□□ -1.45
PKNOX1P55347 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PKNOX1P55347 AC000095.2-202ENST00000637415 154 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 AL449283.1-201ENST00000602631 3403 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 AL591135.1-201ENST00000401578 5914 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PKNOX1P55347 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PKNOX1P55347 MTND5P12-201ENST00000502851 1449 ntBASIC5.99□□□□□ -1.45
PKNOX1P55347 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.98□□□□□ -1.45
PKNOX1P55347 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PKNOX1P55347 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PKNOX1P55347 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PKNOX1P55347 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PKNOX1P55347 AL355834.1-201ENST00000556602 3965 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
PKNOX1P55347 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PKNOX1P55347 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PKNOX1P55347 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PKNOX1P55347 RNA5SP485-201ENST00000365053 119 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 RNA5SP231-201ENST00000410496 138 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.98□□□□□ -1.45
PKNOX1P55347 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.98□□□□□ -1.45
PKNOX1P55347 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 AC063955.1-201ENST00000462872 685 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.98□□□□□ -1.45
PKNOX1P55347 OSTC-204ENST00000512478 663 ntTSL 5 BASIC5.98□□□□□ -1.45
PKNOX1P55347 ODF1-202ENST00000518835 368 ntTSL 3 BASIC5.98□□□□□ -1.45
PKNOX1P55347 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC5.98□□□□□ -1.45
PKNOX1P55347 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.98□□□□□ -1.45
PKNOX1P55347 AC131935.1-201ENST00000524621 333 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PKNOX1P55347 AC135983.3-201ENST00000528049 1226 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 AC124891.1-201ENST00000536322 519 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC5.98□□□□□ -1.45
PKNOX1P55347 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
PKNOX1P55347 AC025283.1-201ENST00000572039 734 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 MIR4732-201ENST00000581873 76 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC5.98□□□□□ -1.45
PKNOX1P55347 AL390877.1-201ENST00000605704 214 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 AL591167.1-201ENST00000607321 456 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 U91328.4-201ENST00000608919 517 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PKNOX1P55347 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.98□□□□□ -1.45
PKNOX1P55347 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.98□□□□□ -1.45
PKNOX1P55347 WDR95P-201ENST00000425638 1542 ntBASIC5.98□□□□□ -1.45
PKNOX1P55347 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PKNOX1P55347 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.98□□□□□ -1.45
PKNOX1P55347 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.98□□□□□ -1.45
PKNOX1P55347 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 AC217777.1-201ENST00000570034 1471 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
PKNOX1P55347 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
PKNOX1P55347 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
PKNOX1P55347 USP24P1-201ENST00000433802 779 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.97□□□□□ -1.45
PKNOX1P55347 WDR82P2-201ENST00000444540 928 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 COX4I1P2-201ENST00000447446 547 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.97□□□□□ -1.45
PKNOX1P55347 RN7SL502P-201ENST00000481857 290 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.97□□□□□ -1.45
PKNOX1P55347 MRPL57P6-201ENST00000506570 309 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 LDHBP3-201ENST00000514909 822 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.97□□□□□ -1.45
PKNOX1P55347 TPM3P3-201ENST00000521343 354 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.97□□□□□ -1.45
PKNOX1P55347 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5.97□□□□□ -1.45
PKNOX1P55347 AL049779.3-201ENST00000557141 606 ntBASIC5.97□□□□□ -1.45
PKNOX1P55347 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms