Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 RNU4-23P-201ENST00000362839 140 ntBASIC7.61□□□□□ -1.19
MRE11P49959 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 RNU6-925P-201ENST00000384629 104 ntBASIC7.61□□□□□ -1.19
MRE11P49959 RN7SKP86-201ENST00000410454 332 ntBASIC7.61□□□□□ -1.19
MRE11P49959 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC7.61□□□□□ -1.19
MRE11P49959 RPL12P16-201ENST00000431098 498 ntBASIC7.61□□□□□ -1.19
MRE11P49959 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC7.61□□□□□ -1.19
MRE11P49959 AC083855.1-201ENST00000440041 258 ntBASIC7.61□□□□□ -1.19
MRE11P49959 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC7.61□□□□□ -1.19
MRE11P49959 AC079781.1-201ENST00000441505 394 ntBASIC7.61□□□□□ -1.19
MRE11P49959 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.61□□□□□ -1.19
MRE11P49959 AC093166.3-201ENST00000448785 303 ntBASIC7.61□□□□□ -1.19
MRE11P49959 MTND2P25-201ENST00000449028 610 ntBASIC7.61□□□□□ -1.19
MRE11P49959 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC7.61□□□□□ -1.19
MRE11P49959 AC009411.2-201ENST00000458359 539 ntTSL 4 BASIC7.61□□□□□ -1.19
MRE11P49959 AC083806.1-201ENST00000468934 316 ntBASIC7.61□□□□□ -1.19
MRE11P49959 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC7.61□□□□□ -1.19
MRE11P49959 CHCHD2P7-201ENST00000508008 452 ntBASIC7.61□□□□□ -1.19
MRE11P49959 AC008628.1-201ENST00000508663 265 ntBASIC7.61□□□□□ -1.19
MRE11P49959 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC7.61□□□□□ -1.19
MRE11P49959 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC7.61□□□□□ -1.19
MRE11P49959 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC7.61□□□□□ -1.19
MRE11P49959 SNHG14-217ENST00000552781 552 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 MIR212-201ENST00000586026 110 ntBASIC7.61□□□□□ -1.19
MRE11P49959 AL512605.1-201ENST00000588215 1263 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 AC009303.3-201ENST00000591103 736 ntBASIC7.61□□□□□ -1.19
MRE11P49959 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC7.61□□□□□ -1.19
MRE11P49959 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC7.61□□□□□ -1.19
MRE11P49959 AL390877.1-201ENST00000605704 214 ntBASIC7.61□□□□□ -1.19
MRE11P49959 AL391834.1-201ENST00000609609 560 ntBASIC7.61□□□□□ -1.19
MRE11P49959 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC7.61□□□□□ -1.19
MRE11P49959 FP325318.1-201ENST00000616097 1263 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 AC090772.4-201ENST00000623599 362 ntBASIC7.61□□□□□ -1.19
MRE11P49959 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC7.61□□□□□ -1.19
MRE11P49959 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC7.61□□□□□ -1.19
MRE11P49959 AL136298.2-201ENST00000556497 1570 ntBASIC7.61□□□□□ -1.19
MRE11P49959 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 QRSL1P1-201ENST00000400977 1540 ntBASIC7.61□□□□□ -1.19
MRE11P49959 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC7.61□□□□□ -1.19
MRE11P49959 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC7.61□□□□□ -1.19
MRE11P49959 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC7.6□□□□□ -1.19
MRE11P49959 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MRE11P49959 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.6□□□□□ -1.19
MRE11P49959 DCC-202ENST00000412726 9525 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MRE11P49959 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MRE11P49959 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.6□□□□□ -1.19
MRE11P49959 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
MRE11P49959 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
MRE11P49959 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC7.6□□□□□ -1.19
MRE11P49959 RNU1-46P-201ENST00000384425 164 ntBASIC7.6□□□□□ -1.19
MRE11P49959 OR6C4-201ENST00000394256 1046 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
MRE11P49959 AC091492.1-201ENST00000419844 272 ntBASIC7.6□□□□□ -1.19
MRE11P49959 AL596268.1-201ENST00000427910 1048 ntBASIC7.6□□□□□ -1.19
MRE11P49959 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC7.6□□□□□ -1.19
MRE11P49959 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC7.6□□□□□ -1.19
MRE11P49959 AL356475.1-201ENST00000440321 341 ntTSL 5 BASIC7.6□□□□□ -1.19
MRE11P49959 OR7E7P-201ENST00000455678 1012 ntBASIC7.6□□□□□ -1.19
MRE11P49959 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC7.6□□□□□ -1.19
MRE11P49959 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC7.6□□□□□ -1.19
MRE11P49959 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC7.6□□□□□ -1.19
MRE11P49959 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.6□□□□□ -1.19
MRE11P49959 AC091096.2-201ENST00000523284 587 ntTSL 3 BASIC7.6□□□□□ -1.19
MRE11P49959 GLYATL1P4-201ENST00000529326 906 ntBASIC7.6□□□□□ -1.19
MRE11P49959 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC7.6□□□□□ -1.19
MRE11P49959 NXPE2P1-201ENST00000543705 726 ntBASIC7.6□□□□□ -1.19
MRE11P49959 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC7.6□□□□□ -1.19
MRE11P49959 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC7.6□□□□□ -1.19
MRE11P49959 AC023158.1-201ENST00000561632 1025 ntBASIC7.6□□□□□ -1.19
MRE11P49959 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC7.6□□□□□ -1.19
MRE11P49959 AL023806.2-201ENST00000603042 263 ntBASIC7.6□□□□□ -1.19
MRE11P49959 AC092960.1-201ENST00000604762 351 ntBASIC7.6□□□□□ -1.19
MRE11P49959 AL591686.2-201ENST00000608241 475 ntTSL 4 BASIC7.6□□□□□ -1.19
MRE11P49959 MIR6886-201ENST00000619864 61 ntBASIC7.6□□□□□ -1.19
MRE11P49959 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
MRE11P49959 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
MRE11P49959 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
MRE11P49959 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC7.6□□□□□ -1.19
MRE11P49959 FGF1-216ENST00000621536 4062 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
MRE11P49959 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
MRE11P49959 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC7.6□□□□□ -1.19
MRE11P49959 AC020658.2-201ENST00000559030 4020 ntBASIC7.6□□□□□ -1.19
MRE11P49959 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
MRE11P49959 RACGAP1P-201ENST00000550663 1879 ntBASIC7.6□□□□□ -1.19
MRE11P49959 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
MRE11P49959 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
MRE11P49959 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
MRE11P49959 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC7.59□□□□□ -1.19
MRE11P49959 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC7.59□□□□□ -1.19
MRE11P49959 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC7.59□□□□□ -1.19
MRE11P49959 AC025470.1-201ENST00000510053 2032 ntBASIC7.59□□□□□ -1.19
MRE11P49959 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC7.59□□□□□ -1.19
MRE11P49959 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
MRE11P49959 AC022613.3-201ENST00000560740 1346 ntBASIC7.59□□□□□ -1.19
MRE11P49959 AL136520.1-201ENST00000600311 1322 ntBASIC7.59□□□□□ -1.19
MRE11P49959 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms