Protein–RNA interactions for Protein: P49916

LIG3, DNA ligase 3, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3P49916 AP005202.2-201ENST00000582386 658 ntTSL 3 BASIC7.51□□□□□ -1.21
LIG3P49916 CUX2P1-201ENST00000606426 298 ntBASIC7.51□□□□□ -1.21
LIG3P49916 AP003481.1-202ENST00000608214 503 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG3P49916 AC243830.2-201ENST00000618067 630 ntBASIC7.51□□□□□ -1.21
LIG3P49916 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LIG3P49916 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
LIG3P49916 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC7.51□□□□□ -1.21
LIG3P49916 PFKM-232ENST00000629846 381 ntTSL 4 BASIC7.51□□□□□ -1.21
LIG3P49916 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC7.51□□□□□ -1.21
LIG3P49916 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC7.51□□□□□ -1.21
LIG3P49916 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG3P49916 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG3P49916 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG3P49916 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LIG3P49916 GOSR2-221ENST00000638892 3808 ntTSL 5 BASIC7.51□□□□□ -1.21
LIG3P49916 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LIG3P49916 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
LIG3P49916 ZNF14-201ENST00000344099 2949 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LIG3P49916 CDY11P-201ENST00000447168 1651 ntBASIC7.51□□□□□ -1.21
LIG3P49916 AC022306.1-201ENST00000560489 1562 ntBASIC7.5□□□□□ -1.21
LIG3P49916 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG3P49916 WASF5P-205ENST00000428639 1455 ntBASIC7.5□□□□□ -1.21
LIG3P49916 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC7.5□□□□□ -1.21
LIG3P49916 UAP1-203ENST00000367925 2069 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
LIG3P49916 AC104958.1-201ENST00000509350 1973 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG3P49916 AP000641.1-201ENST00000531988 1639 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG3P49916 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG3P49916 RBMX2P2-201ENST00000257020 946 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AL078621.1-201ENST00000272567 768 ntBASIC7.5□□□□□ -1.21
LIG3P49916 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
LIG3P49916 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
LIG3P49916 SNORA73B-201ENST00000363217 204 ntBASIC7.5□□□□□ -1.21
LIG3P49916 RNA5SP260-201ENST00000363849 111 ntBASIC7.5□□□□□ -1.21
LIG3P49916 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG3P49916 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LIG3P49916 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG3P49916 RNU6-31P-201ENST00000384388 108 ntBASIC7.5□□□□□ -1.21
LIG3P49916 NDUFV2-202ENST00000400033 942 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG3P49916 AL139806.1-201ENST00000403057 1002 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AL356320.2-201ENST00000417263 507 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG3P49916 NENFP1-201ENST00000419476 466 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AC004870.2-202ENST00000423781 706 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG3P49916 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG3P49916 AL035407.1-201ENST00000429211 571 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG3P49916 AL357314.1-201ENST00000433521 806 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG3P49916 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG3P49916 HMGB2-202ENST00000438704 1032 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LIG3P49916 AC068135.1-201ENST00000446164 246 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AL451074.4-201ENST00000447545 470 ntBASIC7.5□□□□□ -1.21
LIG3P49916 ZNF385D-AS2-202ENST00000448980 370 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG3P49916 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC7.5□□□□□ -1.21
LIG3P49916 AC092570.2-201ENST00000452117 1143 ntBASIC7.5□□□□□ -1.21
LIG3P49916 RPL7P32-201ENST00000457119 744 ntBASIC7.5□□□□□ -1.21
LIG3P49916 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG3P49916 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG3P49916 AC068522.1-201ENST00000482895 345 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.5□□□□□ -1.21
LIG3P49916 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG3P49916 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG3P49916 AC117532.1-201ENST00000514638 323 ntBASIC7.5□□□□□ -1.21
LIG3P49916 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG3P49916 AC083843.1-201ENST00000521444 849 ntTSL 4 BASIC7.5□□□□□ -1.21
LIG3P49916 AC009869.1-201ENST00000530418 528 ntTSL 4 BASIC7.5□□□□□ -1.21
LIG3P49916 AC092865.1-201ENST00000544395 1023 ntBASIC7.5□□□□□ -1.21
LIG3P49916 ATP5G2-205ENST00000549748 728 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG3P49916 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG3P49916 AC010333.1-201ENST00000563116 563 ntTSL 4 BASIC7.5□□□□□ -1.21
LIG3P49916 AC099314.1-201ENST00000563916 562 ntTSL 4 BASIC7.5□□□□□ -1.21
LIG3P49916 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC7.5□□□□□ -1.21
LIG3P49916 NDUFA5P11-201ENST00000567995 343 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AC007599.1-201ENST00000568688 1174 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AC091304.5-201ENST00000568969 158 ntBASIC7.5□□□□□ -1.21
LIG3P49916 RN7SL697P-201ENST00000582484 299 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AC012254.4-201ENST00000588843 273 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AL020997.3-201ENST00000602843 359 ntBASIC7.5□□□□□ -1.21
LIG3P49916 MTND3P19-201ENST00000603825 345 ntBASIC7.5□□□□□ -1.21
LIG3P49916 AC012640.3-201ENST00000607847 430 ntBASIC7.5□□□□□ -1.21
LIG3P49916 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LIG3P49916 AC098679.5-201ENST00000624394 571 ntBASIC7.5□□□□□ -1.21
LIG3P49916 FGL2-202ENST00000637771 989 ntBASIC7.5□□□□□ -1.21
LIG3P49916 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.5□□□□□ -1.21
LIG3P49916 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG3P49916 NCOR1-205ENST00000395857 9501 ntTSL 5 BASIC7.5□□□□□ -1.21
LIG3P49916 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC7.5□□□□□ -1.21
LIG3P49916 NUMB-217ENST00000555738 1553 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG3P49916 NUMB-232ENST00000560335 1586 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LIG3P49916 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG3P49916 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG3P49916 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
LIG3P49916 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG3P49916 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
LIG3P49916 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG3P49916 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG3P49916 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG3P49916 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG3P49916 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
LIG3P49916 PZP-201ENST00000261336 4610 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms