Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-1P43699 NPM1P26-201ENST00000426339 738 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-1P43699 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC007064.2-201ENST00000442403 500 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-1P43699 GAPDHP20-201ENST00000444107 1007 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 AC105918.1-201ENST00000474399 838 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 RPL5P15-201ENST00000475870 897 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 STRADBP1-201ENST00000478954 1281 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 PFN2-213ENST00000494827 793 ntTSL 4 BASIC5.19□□□□□ -1.58
NKX2-1P43699 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC5.19□□□□□ -1.58
NKX2-1P43699 RFPL4AP3-201ENST00000515267 345 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 RNU6-760P-201ENST00000516078 97 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 XAGE1B-205ENST00000518075 472 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC008429.4-201ENST00000521201 182 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 HNRNPCP8-201ENST00000528764 888 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC006120.1-201ENST00000579375 546 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC005546.1-201ENST00000591837 391 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AL360012.1-201ENST00000602813 131 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 AC005014.3-201ENST00000605985 190 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 AC005972.3-201ENST00000606304 481 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 Z98949.1-213ENST00000608921 856 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AL161931.1-201ENST00000612768 246 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 AC007671.1-201ENST00000616957 830 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC241377.1-201ENST00000619797 406 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 AL356094.1-201ENST00000624663 1212 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-1P43699 DLST-216ENST00000626051 252 ntTSL 5 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AC091948.2-201ENST00000636510 279 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
NKX2-1P43699 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 AL137141.1-201ENST00000624622 4836 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 TUBBP10-201ENST00000427668 1301 ntBASIC5.19□□□□□ -1.58
NKX2-1P43699 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
NKX2-1P43699 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
NKX2-1P43699 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC011503.2-201ENST00000594230 1500 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-1P43699 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 EEF1A1P16-201ENST00000325349 1414 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 RN7SKP189-201ENST00000365042 330 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
NKX2-1P43699 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AL358178.1-201ENST00000407698 397 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 RN7SKP268-201ENST00000411107 316 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 RN7SKP30-201ENST00000411373 334 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 RPL12P16-201ENST00000431098 498 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AL590399.4-201ENST00000436561 601 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 MORF4L1P4-201ENST00000450245 976 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC126615.1-201ENST00000470084 630 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AL035690.1-201ENST00000490892 383 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AK4P6-201ENST00000505168 528 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AC093895.1-201ENST00000506480 821 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC5.18□□□□□ -1.58
NKX2-1P43699 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC006518.1-201ENST00000541449 943 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 RBM7-208ENST00000545678 867 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC012414.2-201ENST00000559474 187 ntBASIC5.18□□□□□ -1.58
NKX2-1P43699 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.18□□□□□ -1.58
NKX2-1P43699 AC024085.1-201ENST00000604299 432 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms