Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC6.76□□□□□ -1.33
HOXC8P31273 AC040173.1-201ENST00000572479 580 ntTSL 4 BASIC6.76□□□□□ -1.33
HOXC8P31273 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
HOXC8P31273 AC020765.1-201ENST00000604296 328 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 AC141002.1-201ENST00000607025 279 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
HOXC8P31273 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC8P31273 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
HOXC8P31273 AL033543.1-201ENST00000623440 13454 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 NCOA4P3-201ENST00000513203 1877 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 GNL2P1-201ENST00000451274 2190 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC8P31273 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.76□□□□□ -1.33
HOXC8P31273 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC6.76□□□□□ -1.33
HOXC8P31273 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 PTPRO-208ENST00000542557 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
HOXC8P31273 RBPJP7-201ENST00000442803 1447 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 RBPJP5-201ENST00000449433 1447 ntBASIC6.76□□□□□ -1.33
HOXC8P31273 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
HOXC8P31273 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HOXC8P31273 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC8P31273 CTAGE11P-201ENST00000451540 2353 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXC8P31273 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC8P31273 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC8P31273 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HOXC8P31273 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC8P31273 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.75□□□□□ -1.33
HOXC8P31273 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC8P31273 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HOXC8P31273 TMSB4XP4-201ENST00000323496 618 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC6.75□□□□□ -1.33
HOXC8P31273 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC8P31273 RNU1-24P-201ENST00000364285 165 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
HOXC8P31273 ABCA12-203ENST00000412081 485 ntTSL 2 BASIC6.75□□□□□ -1.33
HOXC8P31273 EEF1B2P8-201ENST00000414101 671 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 RPS15AP30-201ENST00000420976 390 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXC8P31273 RPL12P12-201ENST00000424633 501 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 RPL12P16-201ENST00000431098 498 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 HMGN1P36-201ENST00000446623 298 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 AL122020.1-201ENST00000472287 459 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 SETP21-201ENST00000514799 892 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.75□□□□□ -1.33
HOXC8P31273 EIF4EP5-201ENST00000528228 640 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.75□□□□□ -1.33
HOXC8P31273 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.75□□□□□ -1.33
HOXC8P31273 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.75□□□□□ -1.33
HOXC8P31273 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HOXC8P31273 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.75□□□□□ -1.33
HOXC8P31273 RPL12P48-201ENST00000605620 304 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXC8P31273 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
HOXC8P31273 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC6.75□□□□□ -1.33
HOXC8P31273 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
HOXC8P31273 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC8P31273 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC8P31273 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HOXC8P31273 AL449283.1-201ENST00000602631 3403 ntBASIC6.75□□□□□ -1.33
HOXC8P31273 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC8P31273 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.75□□□□□ -1.33
HOXC8P31273 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
HOXC8P31273 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC8P31273 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC8P31273 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC8P31273 AC027088.4-201ENST00000611559 1947 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC8P31273 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC8P31273 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC8P31273 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC8P31273 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
HOXC8P31273 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
HOXC8P31273 RNU105B-201ENST00000364478 208 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 RNU6-167P-201ENST00000384292 106 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 MIR433-201ENST00000384837 93 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 OR7E101P-201ENST00000400428 513 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 RNA5SP178-201ENST00000410380 128 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC8P31273 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC8P31273 KIF4CP-201ENST00000422742 1279 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 BX323845.3-201ENST00000428215 527 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC8P31273 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC8P31273 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC8P31273 AL445665.1-202ENST00000452436 324 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 AC023141.9-201ENST00000458734 412 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.74□□□□□ -1.33
HOXC8P31273 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC8P31273 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.74□□□□□ -1.33
HOXC8P31273 AC125612.1-201ENST00000547580 377 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.74□□□□□ -1.33
HOXC8P31273 AL356801.1-201ENST00000559320 294 ntBASIC6.74□□□□□ -1.33
HOXC8P31273 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms