Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 AC022325.1-201ENST00000502748 2199 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 AC023632.6-201ENST00000624338 2177 ntBASIC6.5□□□□□ -1.37
HOXA9P31269 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
HOXA9P31269 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 AC091305.2-201ENST00000624049 1576 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 OR52B3P-201ENST00000314715 928 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 RN7SKP292-201ENST00000365522 317 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXA9P31269 AL034345.2-202ENST00000416948 830 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 AL035660.1-201ENST00000422041 222 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXA9P31269 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXA9P31269 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXA9P31269 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXA9P31269 VPS25P1-201ENST00000455691 508 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXA9P31269 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXA9P31269 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC6.49□□□□□ -1.37
HOXA9P31269 SCARNA21.2-201ENST00000516600 166 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 AC079600.1-201ENST00000550326 297 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.49□□□□□ -1.37
HOXA9P31269 AC233702.7-202ENST00000582941 211 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXA9P31269 OR7A11P-201ENST00000597719 953 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 AC006924.1-201ENST00000610750 559 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 AC109309.2-201ENST00000612597 332 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 AC022106.1-201ENST00000612834 766 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXA9P31269 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXA9P31269 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.49□□□□□ -1.37
HOXA9P31269 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXA9P31269 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXA9P31269 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 PPIL1-201ENST00000373699 1739 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.49□□□□□ -1.37
HOXA9P31269 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.49□□□□□ -1.37
HOXA9P31269 MAPK10-287ENST00000641217 3037 ntBASIC6.49□□□□□ -1.37
HOXA9P31269 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.49□□□□□ -1.37
HOXA9P31269 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
HOXA9P31269 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
HOXA9P31269 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA9P31269 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA9P31269 MAP4K4-221ENST00000634702 3800 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA9P31269 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
HOXA9P31269 AL391261.1-201ENST00000555712 1479 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA9P31269 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA9P31269 PATJ-203ENST00000371158 8505 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
HOXA9P31269 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA9P31269 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.48□□□□□ -1.37
HOXA9P31269 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXA9P31269 CD209-203ENST00000315599 4283 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA9P31269 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HOXA9P31269 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
HOXA9P31269 MIR323A-201ENST00000362199 86 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 MIR1203-201ENST00000408812 85 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 EEF1B2P8-201ENST00000414101 671 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXA9P31269 AC245884.2-201ENST00000426257 404 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXA9P31269 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXA9P31269 AL161636.2-201ENST00000445179 927 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXA9P31269 AC093719.1-201ENST00000480427 441 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.48□□□□□ -1.37
HOXA9P31269 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.48□□□□□ -1.37
HOXA9P31269 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXA9P31269 AP000662.1-201ENST00000530952 487 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 AP000919.2-202ENST00000584431 673 ntTSL 3 BASIC6.48□□□□□ -1.37
HOXA9P31269 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.48□□□□□ -1.37
HOXA9P31269 MIR6809-201ENST00000612189 116 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 AC126175.1-201ENST00000617041 758 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 AC096708.4-201ENST00000620563 552 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 AL136228.1-201ENST00000622221 319 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.48□□□□□ -1.37
HOXA9P31269 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
HOXA9P31269 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC6.48□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms