Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DMAP28067 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.31□□□□□ -1.56
HLA-DMAP28067 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
HLA-DMAP28067 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
HLA-DMAP28067 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DMAP28067 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.31□□□□□ -1.56
HLA-DMAP28067 OR9K1P-202ENST00000641111 3217 ntBASIC5.31□□□□□ -1.56
HLA-DMAP28067 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 RN7SKP185-201ENST00000362813 326 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 RN7SKP77-201ENST00000363261 353 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 NPPA-AS1-201ENST00000400892 936 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 MEG8-201ENST00000414488 800 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 AC000089.1-201ENST00000424559 801 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 RPL12P18-201ENST00000437175 325 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 AC092106.1-201ENST00000444291 373 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 SLAMF6P1-201ENST00000451067 602 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 RPS16P9-201ENST00000477220 427 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 SETP21-201ENST00000514799 892 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 AC020937.1-201ENST00000519677 1013 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 PPIAP14-201ENST00000577627 496 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 AC006924.1-201ENST00000610750 559 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 MIR6085-201ENST00000618314 110 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.3□□□□□ -1.56
HLA-DMAP28067 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 AP005432.1-201ENST00000580891 3485 ntBASIC5.3□□□□□ -1.56
HLA-DMAP28067 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
HLA-DMAP28067 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DMAP28067 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DMAP28067 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DMAP28067 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AC092701.1-201ENST00000623627 1551 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DMAP28067 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DMAP28067 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DMAP28067 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AL161756.3-201ENST00000641216 2071 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DMAP28067 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AC074375.1-201ENST00000372993 192 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AL445238.1-204ENST00000400311 463 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 RANP6-201ENST00000413691 644 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 AL662791.3-201ENST00000413771 776 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 RPLP1P10-201ENST00000413972 339 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AC091492.1-201ENST00000419844 272 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AL157884.1-201ENST00000424561 454 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 MGAT2P2-201ENST00000427194 797 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 ATP5LP4-201ENST00000434169 307 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 RPS21P1-201ENST00000434479 247 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AL445228.1-201ENST00000449525 333 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 NPM1P19-201ENST00000450070 712 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 RSU1P1-201ENST00000453416 441 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AC073594.1-201ENST00000462065 364 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 RN7SL91P-201ENST00000469313 291 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 RPL12P24-201ENST00000474907 486 ntBASIC5.29□□□□□ -1.56
HLA-DMAP28067 SEPT7P9-201ENST00000475691 413 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
HLA-DMAP28067 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AC008629.1-201ENST00000506486 812 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.29□□□□□ -1.56
HLA-DMAP28067 AC022679.2-201ENST00000522186 813 ntTSL 2 BASIC5.29□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms