Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH3P22223 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.23□□□□□ -1.41
CDH3P22223 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 RN7SL168P-201ENST00000463821 279 ntBASIC6.23□□□□□ -1.41
CDH3P22223 GM2AP2-201ENST00000491764 562 ntBASIC6.23□□□□□ -1.41
CDH3P22223 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH3P22223 HMGN1P16-201ENST00000508308 283 ntBASIC6.23□□□□□ -1.41
CDH3P22223 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH3P22223 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH3P22223 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.23□□□□□ -1.41
CDH3P22223 AL133399.1-201ENST00000527476 298 ntBASIC6.23□□□□□ -1.41
CDH3P22223 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH3P22223 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH3P22223 AC026898.1-201ENST00000586404 571 ntBASIC6.23□□□□□ -1.41
CDH3P22223 AL359704.2-201ENST00000604335 521 ntBASIC6.23□□□□□ -1.41
CDH3P22223 AL161912.3-201ENST00000605404 628 ntBASIC6.23□□□□□ -1.41
CDH3P22223 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH3P22223 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.23□□□□□ -1.41
CDH3P22223 AL354950.1-201ENST00000614150 568 ntBASIC6.23□□□□□ -1.41
CDH3P22223 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.23□□□□□ -1.41
CDH3P22223 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH3P22223 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
CDH3P22223 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
CDH3P22223 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC6.23□□□□□ -1.41
CDH3P22223 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 NLRP3P1-201ENST00000622303 1785 ntBASIC6.23□□□□□ -1.41
CDH3P22223 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
CDH3P22223 AC232271.1-201ENST00000602455 2715 ntBASIC6.22□□□□□ -1.41
CDH3P22223 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH3P22223 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CDH3P22223 SAGE3P-201ENST00000619800 1635 ntBASIC6.22□□□□□ -1.41
CDH3P22223 AL359976.1-201ENST00000418655 3528 ntBASIC6.22□□□□□ -1.41
CDH3P22223 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH3P22223 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH3P22223 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH3P22223 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH3P22223 DEFB135-201ENST00000382208 234 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH3P22223 RN7SKP86-201ENST00000410454 332 ntBASIC6.22□□□□□ -1.41
CDH3P22223 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH3P22223 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH3P22223 AL139415.1-201ENST00000424862 352 ntBASIC6.22□□□□□ -1.41
CDH3P22223 OR6C71P-201ENST00000432580 913 ntBASIC6.22□□□□□ -1.41
CDH3P22223 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH3P22223 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH3P22223 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH3P22223 AC118758.1-202ENST00000454719 225 ntBASIC6.22□□□□□ -1.41
CDH3P22223 RARRES2P3-201ENST00000457739 473 ntBASIC6.22□□□□□ -1.41
CDH3P22223 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CDH3P22223 RPL23AP64-201ENST00000469465 435 ntBASIC6.22□□□□□ -1.41
CDH3P22223 MARK2P8-201ENST00000476069 952 ntBASIC6.22□□□□□ -1.41
CDH3P22223 AC012123.2-201ENST00000485809 248 ntBASIC6.22□□□□□ -1.41
CDH3P22223 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH3P22223 ZFPM2-AS1-201ENST00000509144 542 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH3P22223 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH3P22223 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH3P22223 OR4A13P-201ENST00000529316 942 ntBASIC6.22□□□□□ -1.41
CDH3P22223 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH3P22223 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.22□□□□□ -1.41
CDH3P22223 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.22□□□□□ -1.41
CDH3P22223 AP000619.2-201ENST00000546014 969 ntBASIC6.22□□□□□ -1.41
CDH3P22223 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH3P22223 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
CDH3P22223 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH3P22223 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.22□□□□□ -1.41
CDH3P22223 MIR7109-201ENST00000613748 65 ntBASIC6.22□□□□□ -1.41
CDH3P22223 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH3P22223 PPP3CB-AS1-213ENST00000620302 501 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH3P22223 MIR6811-201ENST00000620409 58 ntBASIC6.22□□□□□ -1.41
CDH3P22223 MIR6806-201ENST00000622141 64 ntBASIC6.22□□□□□ -1.41
CDH3P22223 AL121936.2-201ENST00000641935 662 ntBASIC6.22□□□□□ -1.41
CDH3P22223 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH3P22223 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH3P22223 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH3P22223 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
CDH3P22223 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH3P22223 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC6.22□□□□□ -1.41
CDH3P22223 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
CDH3P22223 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
CDH3P22223 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDH3P22223 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.21□□□□□ -1.41
CDH3P22223 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDH3P22223 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.21□□□□□ -1.41
CDH3P22223 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH3P22223 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH3P22223 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH3P22223 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH3P22223 OR2M1P-201ENST00000318104 951 ntBASIC6.21□□□□□ -1.42
CDH3P22223 SNORD35A-201ENST00000363389 86 ntBASIC6.21□□□□□ -1.42
CDH3P22223 RN7SKP281-201ENST00000410472 352 ntBASIC6.21□□□□□ -1.42
CDH3P22223 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH3P22223 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH3P22223 OSTCP4-201ENST00000424397 449 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms