Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 HMGB1P13-201ENST00000406019 642 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 RN7SKP205-201ENST00000410999 307 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 RPSAP60-201ENST00000415403 880 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AL590806.1-201ENST00000415818 853 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC8.15□□□□□ -1.1
ERCC3P19447 MTCO3P4-201ENST00000419236 787 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC8.15□□□□□ -1.1
ERCC3P19447 RPA2P2-201ENST00000419698 796 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ERCC3P19447 RPS4XP16-201ENST00000427198 791 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AL513304.1-201ENST00000432987 359 ntTSL 3 BASIC8.15□□□□□ -1.1
ERCC3P19447 SETP8-201ENST00000435341 628 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
ERCC3P19447 LINC01771-201ENST00000445039 567 ntTSL 4 BASIC8.15□□□□□ -1.1
ERCC3P19447 AC002486.2-201ENST00000447806 590 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 ZNF886P-201ENST00000450781 723 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AC093166.2-201ENST00000455969 1017 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC8.15□□□□□ -1.1
ERCC3P19447 RPL7P32-201ENST00000457119 744 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 RPS20P4-201ENST00000461659 355 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.15□□□□□ -1.1
ERCC3P19447 RPS7P11-201ENST00000484240 586 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 RPL34P33-201ENST00000486062 334 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC8.15□□□□□ -1.1
ERCC3P19447 MINOS1P4-201ENST00000515470 318 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 RN7SKP34-201ENST00000516142 244 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC8.15□□□□□ -1.1
ERCC3P19447 MTATP6P15-201ENST00000527233 835 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.15□□□□□ -1.1
ERCC3P19447 AC009097.3-201ENST00000563557 1018 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AC025283.1-201ENST00000572039 734 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC8.15□□□□□ -1.1
ERCC3P19447 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC8.15□□□□□ -1.1
ERCC3P19447 AC005837.2-201ENST00000587459 479 ntAPPRIS P1 TSL 5 BASIC8.15□□□□□ -1.1
ERCC3P19447 REV3L-214ENST00000619481 969 ntTSL 5 BASIC8.15□□□□□ -1.1
ERCC3P19447 RPL23AP61-201ENST00000623642 466 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AC025262.3-201ENST00000623666 360 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 AC073488.2-201ENST00000631903 751 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 CLUHP10-201ENST00000631979 980 ntBASIC8.15□□□□□ -1.1
ERCC3P19447 DUXAP8-203ENST00000437781 2398 ntTSL 2 BASIC8.15□□□□□ -1.1
ERCC3P19447 PTPN3-203ENST00000412145 8765 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
ERCC3P19447 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC8.15□□□□□ -1.11
ERCC3P19447 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.15□□□□□ -1.11
ERCC3P19447 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC8.15□□□□□ -1.11
ERCC3P19447 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC8.15□□□□□ -1.11
ERCC3P19447 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC8.14□□□□□ -1.11
ERCC3P19447 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 CLCN5-201ENST00000307367 3177 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 HSD17B13-202ENST00000328546 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 HEPH-209ENST00000519389 6013 ntAPPRIS P3 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 ABCB5-205ENST00000443026 2247 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC8.14□□□□□ -1.11
ERCC3P19447 ZBTB25-204ENST00000608382 10372 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 POGZ-218ENST00000531094 4415 ntAPPRIS ALT1 TSL 2 BASIC8.14□□□□□ -1.11
ERCC3P19447 ZNF841-201ENST00000389534 3503 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.11
ERCC3P19447 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 AC117409.1-201ENST00000470499 1310 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 ADH4-212ENST00000629236 1974 ntTSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 PDZD2-202ENST00000438447 11704 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 RN7SKP191-201ENST00000364713 306 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC8.14□□□□□ -1.11
ERCC3P19447 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 MIR513B-201ENST00000385136 84 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
ERCC3P19447 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 AL033519.1-201ENST00000407266 307 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 RN7SKP254-201ENST00000410685 310 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC8.14□□□□□ -1.11
ERCC3P19447 USP9YP21-201ENST00000420603 432 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 MTND5P25-201ENST00000430499 799 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 SNRPFP2-201ENST00000440710 251 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 PCNPP2-201ENST00000441651 455 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 AL034369.1-201ENST00000453808 477 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 RN7SL492P-201ENST00000460700 295 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 NAP1L1P3-201ENST00000462291 880 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 AC079080.1-201ENST00000479841 822 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 AC134050.1-201ENST00000495088 933 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 RPL5P11-201ENST00000498068 893 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 AC114324.2-202ENST00000503812 134 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 AC117383.1-201ENST00000507698 422 ntTSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 AP005597.2-201ENST00000526238 341 ntBASIC8.14□□□□□ -1.11
ERCC3P19447 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8.14□□□□□ -1.11
ERCC3P19447 MS4A3-208ENST00000534744 507 ntTSL 1 (best) BASIC8.14□□□□□ -1.11
ERCC3P19447 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 BLID-201ENST00000560104 862 ntAPPRIS P1 BASIC8.14□□□□□ -1.11
ERCC3P19447 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC8.14□□□□□ -1.11
ERCC3P19447 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC8.14□□□□□ -1.11
ERCC3P19447 AC007346.1-201ENST00000569208 867 ntBASIC8.14□□□□□ -1.11
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms