Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
FREM3P0C091 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.56□□□□□ -1.52
FREM3P0C091 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
FREM3P0C091 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
FREM3P0C091 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
FREM3P0C091 OR13K1P-201ENST00000444577 975 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC5.56□□□□□ -1.52
FREM3P0C091 AL035690.1-201ENST00000490892 383 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 IGKV1D-22-201ENST00000518953 324 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC5.56□□□□□ -1.52
FREM3P0C091 IGKV3D-34-201ENST00000522638 302 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 IGKV2-4-201ENST00000523070 340 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 AC027369.2-201ENST00000528030 440 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 AC092865.1-201ENST00000544395 1023 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 AC007494.1-201ENST00000562293 760 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 SUPT4H1-207ENST00000581540 668 ntTSL 2 BASIC5.56□□□□□ -1.52
FREM3P0C091 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.56□□□□□ -1.52
FREM3P0C091 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
FREM3P0C091 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC5.56□□□□□ -1.52
FREM3P0C091 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.56□□□□□ -1.52
FREM3P0C091 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.56□□□□□ -1.52
FREM3P0C091 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 AC005225.5-201ENST00000623547 2225 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 MYPN-204ENST00000540630 5707 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
FREM3P0C091 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.56□□□□□ -1.52
FREM3P0C091 HMGA1P8-201ENST00000414130 321 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 RPL23AP19-201ENST00000436229 369 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.56□□□□□ -1.52
FREM3P0C091 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.56□□□□□ -1.52
FREM3P0C091 RNA5SP206-201ENST00000516703 121 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 AC036111.2-201ENST00000533247 901 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 AC090236.2-201ENST00000587933 1101 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 AC024255.1-201ENST00000614376 102 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 AC127024.8-201ENST00000623719 2094 ntBASIC5.56□□□□□ -1.52
FREM3P0C091 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
FREM3P0C091 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.56□□□□□ -1.52
FREM3P0C091 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
FREM3P0C091 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
FREM3P0C091 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC5.55□□□□□ -1.52
FREM3P0C091 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.55□□□□□ -1.52
FREM3P0C091 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC5.55□□□□□ -1.52
FREM3P0C091 AC092646.2-201ENST00000431242 2095 ntBASIC5.55□□□□□ -1.52
FREM3P0C091 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 GUCY1B2-204ENST00000531898 1979 ntBASIC5.55□□□□□ -1.52
FREM3P0C091 AL353763.1-201ENST00000624467 1628 ntBASIC5.55□□□□□ -1.52
FREM3P0C091 BPY2-201ENST00000331070 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 RNU1-134P-201ENST00000362935 165 ntBASIC5.55□□□□□ -1.52
FREM3P0C091 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.55□□□□□ -1.52
FREM3P0C091 BPY2C-201ENST00000382287 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.55□□□□□ -1.52
FREM3P0C091 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.55□□□□□ -1.52
FREM3P0C091 NPIPB1P-202ENST00000588786 828 ntBASIC5.55□□□□□ -1.52
FREM3P0C091 TLR10-207ENST00000613579 3801 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
FREM3P0C091 MIR6861-201ENST00000618657 64 ntBASIC5.55□□□□□ -1.52
FREM3P0C091 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC5.55□□□□□ -1.52
FREM3P0C091 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.55□□□□□ -1.52
FREM3P0C091 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.55□□□□□ -1.52
FREM3P0C091 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.55□□□□□ -1.52
FREM3P0C091 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 EIF3EP1-201ENST00000433978 1316 ntBASIC5.55□□□□□ -1.52
FREM3P0C091 AL117378.2-201ENST00000622916 1337 ntBASIC5.55□□□□□ -1.52
FREM3P0C091 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC5.55□□□□□ -1.52
FREM3P0C091 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.55□□□□□ -1.52
FREM3P0C091 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
FREM3P0C091 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
FREM3P0C091 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.55□□□□□ -1.52
FREM3P0C091 MRO-201ENST00000256425 5166 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FREM3P0C091 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FREM3P0C091 HSPD1P8-201ENST00000400121 1658 ntBASIC5.54□□□□□ -1.52
FREM3P0C091 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
FREM3P0C091 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
FREM3P0C091 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
FREM3P0C091 SNORA64.1-201ENST00000362600 132 ntBASIC5.54□□□□□ -1.52
FREM3P0C091 AL445238.1-204ENST00000400311 463 ntBASIC5.54□□□□□ -1.52
FREM3P0C091 RPL7AP14-201ENST00000424041 802 ntBASIC5.54□□□□□ -1.52
FREM3P0C091 AC130360.1-201ENST00000425489 1117 ntBASIC5.54□□□□□ -1.52
FREM3P0C091 OR2L9P-201ENST00000444456 913 ntBASIC5.54□□□□□ -1.52
FREM3P0C091 AL445687.2-201ENST00000458156 728 ntBASIC5.54□□□□□ -1.52
FREM3P0C091 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.54□□□□□ -1.52
FREM3P0C091 PRMT5P1-201ENST00000514351 598 ntBASIC5.54□□□□□ -1.52
FREM3P0C091 Y_RNA.667-201ENST00000516212 107 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms