Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC6.72□□□□□ -1.33
RB1P06400 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.72□□□□□ -1.33
RB1P06400 AC026348.1-201ENST00000462549 1053 ntBASIC6.72□□□□□ -1.33
RB1P06400 AC092865.4-201ENST00000477936 615 ntBASIC6.72□□□□□ -1.33
RB1P06400 AL136038.1-201ENST00000497246 351 ntBASIC6.72□□□□□ -1.33
RB1P06400 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.72□□□□□ -1.33
RB1P06400 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.72□□□□□ -1.33
RB1P06400 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.72□□□□□ -1.33
RB1P06400 OR5D2P-201ENST00000524390 911 ntBASIC6.72□□□□□ -1.33
RB1P06400 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.72□□□□□ -1.33
RB1P06400 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RB1P06400 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.72□□□□□ -1.33
RB1P06400 AC051619.2-201ENST00000559063 397 ntBASIC6.72□□□□□ -1.33
RB1P06400 AC092121.1-201ENST00000569452 202 ntBASIC6.72□□□□□ -1.33
RB1P06400 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.72□□□□□ -1.33
RB1P06400 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.72□□□□□ -1.33
RB1P06400 AC009237.12-201ENST00000604755 742 ntBASIC6.72□□□□□ -1.33
RB1P06400 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.72□□□□□ -1.33
RB1P06400 AL049767.1-202ENST00000637826 242 ntBASIC6.72□□□□□ -1.33
RB1P06400 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.72□□□□□ -1.33
RB1P06400 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RB1P06400 AL139384.2-201ENST00000613809 3590 ntBASIC6.72□□□□□ -1.33
RB1P06400 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
RB1P06400 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
RB1P06400 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.72□□□□□ -1.33
RB1P06400 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RB1P06400 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
RB1P06400 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
RB1P06400 AC011455.2-201ENST00000599320 3336 ntBASIC6.71□□□□□ -1.33
RB1P06400 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
RB1P06400 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RB1P06400 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RB1P06400 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
RB1P06400 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RB1P06400 AC005839.1-201ENST00000624148 3213 ntBASIC6.71□□□□□ -1.33
RB1P06400 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
RB1P06400 UVRAG-205ENST00000528420 2463 ntTSL 2 BASIC6.71□□□□□ -1.33
RB1P06400 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
RB1P06400 AC009237.3-203ENST00000442128 3551 ntBASIC6.71□□□□□ -1.33
RB1P06400 LCOR-201ENST00000286067 4542 ntBASIC6.71□□□□□ -1.34
RB1P06400 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RB1P06400 AC123769.1-201ENST00000530992 3192 ntBASIC6.71□□□□□ -1.34
RB1P06400 RNFT1P3-201ENST00000340898 1052 ntBASIC6.71□□□□□ -1.34
RB1P06400 MIR640-201ENST00000385086 96 ntBASIC6.71□□□□□ -1.34
RB1P06400 AF064858.3-201ENST00000419664 509 ntTSL 5 BASIC6.71□□□□□ -1.34
RB1P06400 AC013410.1-201ENST00000436223 1232 ntBASIC6.71□□□□□ -1.34
RB1P06400 PPIAP10-201ENST00000438675 458 ntBASIC6.71□□□□□ -1.34
RB1P06400 SEPT14P12-201ENST00000442280 560 ntBASIC6.71□□□□□ -1.34
RB1P06400 AC011742.2-201ENST00000443818 352 ntBASIC6.71□□□□□ -1.34
RB1P06400 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.71□□□□□ -1.34
RB1P06400 MORF4-201ENST00000447135 971 ntBASIC6.71□□□□□ -1.34
RB1P06400 AL445665.1-202ENST00000452436 324 ntBASIC6.71□□□□□ -1.34
RB1P06400 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC6.71□□□□□ -1.34
RB1P06400 RN7SL629P-201ENST00000489622 285 ntBASIC6.71□□□□□ -1.34
RB1P06400 CEP170-216ENST00000490813 1070 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
RB1P06400 AP000926.3-201ENST00000497201 299 ntBASIC6.71□□□□□ -1.34
RB1P06400 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.71□□□□□ -1.34
RB1P06400 RNA5SP434-201ENST00000516647 121 ntBASIC6.71□□□□□ -1.34
RB1P06400 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC6.71□□□□□ -1.34
RB1P06400 TRAV11-201ENST00000539512 339 ntBASIC6.71□□□□□ -1.34
RB1P06400 AC013244.1-201ENST00000604279 193 ntBASIC6.71□□□□□ -1.34
RB1P06400 AL352984.2-201ENST00000611153 546 ntBASIC6.71□□□□□ -1.34
RB1P06400 MIR6793-201ENST00000612376 63 ntBASIC6.71□□□□□ -1.34
RB1P06400 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RB1P06400 AC002044.3-201ENST00000623314 541 ntBASIC6.71□□□□□ -1.34
RB1P06400 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
RB1P06400 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.71□□□□□ -1.34
RB1P06400 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.71□□□□□ -1.34
RB1P06400 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RB1P06400 OLFM4-201ENST00000219022 2897 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RB1P06400 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RB1P06400 NAV3-202ENST00000536525 7386 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RB1P06400 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RB1P06400 LRBA-201ENST00000357115 9899 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.34
RB1P06400 VTCN1-201ENST00000328189 2289 ntTSL 5 BASIC6.71□□□□□ -1.34
RB1P06400 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RB1P06400 AC233968.1-201ENST00000611212 1300 ntBASIC6.71□□□□□ -1.34
RB1P06400 CXCR6-204ENST00000458629 2805 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
RB1P06400 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
RB1P06400 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
RB1P06400 STAMBPL1-201ENST00000371922 1899 ntTSL 2 BASIC6.7□□□□□ -1.34
RB1P06400 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.7□□□□□ -1.34
RB1P06400 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 INTS12-202ENST00000394735 1927 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 AC010168.2-201ENST00000562691 5428 ntBASIC6.7□□□□□ -1.34
RB1P06400 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.7□□□□□ -1.34
RB1P06400 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.7□□□□□ -1.34
RB1P06400 AL161901.1-201ENST00000624954 3425 ntBASIC6.7□□□□□ -1.34
RB1P06400 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
RB1P06400 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RB1P06400 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC6.7□□□□□ -1.34
RB1P06400 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.7□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms