Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 AC010287.1-201ENST00000566916 357 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 ZNF322P1-201ENST00000568013 1209 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 RPL29P33-201ENST00000587474 316 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AC141002.1-201ENST00000607025 279 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.89□□□□□ -1.63
SSSCA1O60232 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC4.89□□□□□ -1.63
SSSCA1O60232 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
SSSCA1O60232 C8orf34-AS1-201ENST00000512294 1600 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSSCA1O60232 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
SSSCA1O60232 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SSSCA1O60232 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSSCA1O60232 AL158152.1-201ENST00000602652 1435 ntBASIC4.89□□□□□ -1.63
SSSCA1O60232 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC024651.2-201ENST00000562480 2098 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 ADAM24P-201ENST00000398655 2101 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 GKN2-202ENST00000481498 1498 ntTSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC022325.1-201ENST00000502748 2199 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
SSSCA1O60232 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.88□□□□□ -1.63
SSSCA1O60232 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 MIR133A2-201ENST00000347538 102 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC4.88□□□□□ -1.63
SSSCA1O60232 AL158827.1-201ENST00000416300 391 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 MICG-208ENST00000416822 132 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AC007879.3-201ENST00000417096 556 ntTSL 4 BASIC4.88□□□□□ -1.63
SSSCA1O60232 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 RPS7P14-201ENST00000426405 583 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 CENPN-204ENST00000428963 971 ntTSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC138761.5-201ENST00000433967 325 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AL590399.4-201ENST00000436561 601 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 PPIAP10-201ENST00000438675 458 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 REG1CP-206ENST00000447469 496 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC4.88□□□□□ -1.63
SSSCA1O60232 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC018645.1-201ENST00000505003 109 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AC025188.1-201ENST00000507514 600 ntTSL 3 BASIC4.88□□□□□ -1.63
SSSCA1O60232 RNA5SP418-201ENST00000515951 117 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AP001858.2-201ENST00000536213 601 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC007346.2-201ENST00000564816 892 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 PPIAP14-201ENST00000577627 496 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 MIR7515HG-250ENST00000592565 856 ntTSL 5 BASIC4.88□□□□□ -1.63
SSSCA1O60232 AC008555.7-201ENST00000605008 583 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AL137000.1-201ENST00000610528 1244 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 uc_338.26-201ENST00000612659 160 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AC010998.3-201ENST00000613871 631 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AC009283.1-201ENST00000615852 645 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 AL157762.1-201ENST00000619612 415 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC4.88□□□□□ -1.63
SSSCA1O60232 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC4.88□□□□□ -1.63
SSSCA1O60232 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 NCOA4P2-201ENST00000340589 1813 ntBASIC4.88□□□□□ -1.63
SSSCA1O60232 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC4.88□□□□□ -1.63
SSSCA1O60232 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
SSSCA1O60232 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC011933.2-201ENST00000578539 2790 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 S100A4-201ENST00000354332 566 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 MIR1231-201ENST00000408101 92 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 AC024937.2-201ENST00000411669 1242 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 AC007384.1-202ENST00000417026 891 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
SSSCA1O60232 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC4.87□□□□□ -1.63
SSSCA1O60232 HNRNPA1P29-201ENST00000426409 879 ntBASIC4.87□□□□□ -1.63
SSSCA1O60232 MTND2P40-201ENST00000436718 841 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 438.8 ms