Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
SMAD6O43541 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
SMAD6O43541 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC6.35□□□□□ -1.39
SMAD6O43541 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.35□□□□□ -1.39
SMAD6O43541 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 GPRIN3-202ENST00000609438 14244 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SMAD6O43541 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 ETF1-203ENST00000503014 1736 ntTSL 2 BASIC6.34□□□□□ -1.39
SMAD6O43541 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
SMAD6O43541 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.34□□□□□ -1.39
SMAD6O43541 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.34□□□□□ -1.39
SMAD6O43541 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
SMAD6O43541 CCL7-202ENST00000394627 696 ntTSL 3 BASIC6.34□□□□□ -1.39
SMAD6O43541 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.34□□□□□ -1.39
SMAD6O43541 UBE2V1P14-201ENST00000415815 558 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 CYP4F30P-202ENST00000420048 405 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.34□□□□□ -1.39
SMAD6O43541 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.34□□□□□ -1.39
SMAD6O43541 PPIAP10-201ENST00000438675 458 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 OR52I1-201ENST00000450052 1050 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 Z83838.1-202ENST00000456225 839 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 MTND2P39-201ENST00000457230 764 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 RNU6-964P-201ENST00000516524 69 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.34□□□□□ -1.39
SMAD6O43541 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.34□□□□□ -1.39
SMAD6O43541 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
SMAD6O43541 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC6.34□□□□□ -1.39
SMAD6O43541 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.34□□□□□ -1.39
SMAD6O43541 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 AC027229.1-201ENST00000583887 253 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC6.34□□□□□ -1.39
SMAD6O43541 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC6.34□□□□□ -1.39
SMAD6O43541 DYNLL1P1-201ENST00000595442 269 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 AC092574.1-201ENST00000609771 420 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 AC093829.1-201ENST00000506662 1618 ntBASIC6.34□□□□□ -1.39
SMAD6O43541 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.34□□□□□ -1.39
SMAD6O43541 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
SMAD6O43541 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
SMAD6O43541 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC6.34□□□□□ -1.4
SMAD6O43541 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
SMAD6O43541 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.34□□□□□ -1.4
SMAD6O43541 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.33□□□□□ -1.4
SMAD6O43541 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.33□□□□□ -1.4
SMAD6O43541 ZCCHC6-206ENST00000375963 5379 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.33□□□□□ -1.4
SMAD6O43541 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.33□□□□□ -1.4
SMAD6O43541 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 OR11H13P-201ENST00000359695 979 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 RNA5SP333-201ENST00000363466 118 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 RNA5SP334-201ENST00000364825 118 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 RN7SKP144-201ENST00000411108 279 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 GAPDHP75-201ENST00000433910 943 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 AL451136.1-201ENST00000435399 325 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 PNKDP1-201ENST00000435914 430 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 AL590399.4-201ENST00000436561 601 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 AMYP1-201ENST00000440059 1023 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 BTBD7P2-201ENST00000441962 620 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 RANP2-201ENST00000456833 229 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.33□□□□□ -1.4
SMAD6O43541 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
SMAD6O43541 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC6.33□□□□□ -1.4
SMAD6O43541 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.33□□□□□ -1.4
SMAD6O43541 AC092865.1-201ENST00000544395 1023 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 MYL2-203ENST00000548438 664 ntTSL 3 BASIC6.33□□□□□ -1.4
SMAD6O43541 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.33□□□□□ -1.4
SMAD6O43541 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.33□□□□□ -1.4
SMAD6O43541 AC090888.3-201ENST00000558917 509 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.33□□□□□ -1.4
SMAD6O43541 TEX41-218ENST00000596540 882 ntTSL 5 BASIC6.33□□□□□ -1.4
SMAD6O43541 RN7SL261P-201ENST00000613441 282 ntBASIC6.33□□□□□ -1.4
SMAD6O43541 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms