Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6□□□□□ -1.45
PDLIM1O00151 AC010287.1-201ENST00000566916 357 ntBASIC6□□□□□ -1.45
PDLIM1O00151 MIR744-201ENST00000578242 98 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6□□□□□ -1.45
PDLIM1O00151 AC063977.7-201ENST00000594454 337 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6□□□□□ -1.45
PDLIM1O00151 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC6□□□□□ -1.45
PDLIM1O00151 IGKV2OR2-7-201ENST00000604652 304 ntBASIC6□□□□□ -1.45
PDLIM1O00151 HERC4-205ENST00000412272 4211 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM1O00151 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
PDLIM1O00151 AC092701.1-201ENST00000623627 1551 ntBASIC6□□□□□ -1.45
PDLIM1O00151 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6□□□□□ -1.45
PDLIM1O00151 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6□□□□□ -1.45
PDLIM1O00151 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM1O00151 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM1O00151 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
PDLIM1O00151 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDLIM1O00151 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6□□□□□ -1.45
PDLIM1O00151 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDLIM1O00151 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC5.99□□□□□ -1.45
PDLIM1O00151 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.99□□□□□ -1.45
PDLIM1O00151 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDLIM1O00151 DMD-228ENST00000541735 7080 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM1O00151 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 TCP1P3-201ENST00000414406 1498 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM1O00151 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 CD200R1L-201ENST00000398214 1296 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM1O00151 AL353133.1-201ENST00000407695 401 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 AL136100.1-201ENST00000407696 330 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 RNA5SP431-201ENST00000410312 120 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 PTPN2P1-201ENST00000423212 1072 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 AC000089.1-201ENST00000424559 801 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM1O00151 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM1O00151 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM1O00151 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC105420.1-201ENST00000504389 582 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 B3GNTL1P1-201ENST00000509174 289 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 AC010442.1-201ENST00000515583 816 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM1O00151 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC026770.1-201ENST00000558994 581 ntTSL 4 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AL390718.1-201ENST00000566904 506 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC090651.1-201ENST00000567865 634 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.99□□□□□ -1.45
PDLIM1O00151 DIMT1P1-201ENST00000603970 763 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 MIR6849-201ENST00000618543 69 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM1O00151 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM1O00151 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC012078.1-201ENST00000405035 1646 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM1O00151 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDLIM1O00151 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.99□□□□□ -1.45
PDLIM1O00151 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
PDLIM1O00151 AC138907.8-201ENST00000623981 2256 ntBASIC5.99□□□□□ -1.45
PDLIM1O00151 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.98□□□□□ -1.45
PDLIM1O00151 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM1O00151 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM1O00151 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM1O00151 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM1O00151 RFC1-202ENST00000381897 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM1O00151 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM1O00151 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
PDLIM1O00151 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM1O00151 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.98□□□□□ -1.45
PDLIM1O00151 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC092376.2-201ENST00000622621 4116 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDLIM1O00151 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM1O00151 ASPH-204ENST00000389204 1290 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
PDLIM1O00151 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC026310.1-201ENST00000396004 378 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 AL359694.1-201ENST00000403247 604 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC5.98□□□□□ -1.45
PDLIM1O00151 AC079922.1-201ENST00000443291 359 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 OR13K1P-201ENST00000444577 975 ntBASIC5.98□□□□□ -1.45
PDLIM1O00151 AL121578.2-201ENST00000448797 447 ntBASIC5.98□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms