Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 OR2AK2-201ENST00000366480 1154 ntAPPRIS ALT2 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 OR4E2-201ENST00000408935 942 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 RN7SKP199-201ENST00000410325 305 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 VDAC1P10-201ENST00000416715 891 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL590730.1-202ENST00000418875 321 ntTSL 2 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL627308.2-201ENST00000420014 432 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 BX470209.1-201ENST00000421297 916 ntTSL 3 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 CYCSP52-201ENST00000422857 310 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 GPN3P1-201ENST00000423883 535 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL389925.1-201ENST00000432257 728 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 ZNF195-208ENST00000438262 1018 ntTSL 3 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AKR1C3-202ENST00000439082 972 ntAPPRIS ALT1 TSL 5 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 MTND6P18-201ENST00000439477 513 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 ARAFP2-201ENST00000440565 559 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL161626.1-201ENST00000441480 490 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC245291.3-201ENST00000443400 292 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 GOT2P2-201ENST00000450663 1251 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC009955.1-201ENST00000455896 271 ntTSL 5 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC011225.1-201ENST00000457751 369 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 WBP1LP1-201ENST00000460451 896 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC135999.1-201ENST00000478962 479 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 RN7SL124P-201ENST00000498656 285 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 ZBED5-AS1-201ENST00000501079 1071 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC008945.1-201ENST00000505144 499 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC113430.1-201ENST00000506872 718 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 LEF1-AS1-205ENST00000508286 444 ntTSL 2 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 CFI-204ENST00000510800 667 ntTSL 2 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AF186190.1-201ENST00000517470 480 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AP000873.4-201ENST00000528133 905 ntTSL 3 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 GLYATL1P4-201ENST00000529326 906 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AP000763.1-201ENST00000539481 325 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02413-202ENST00000552353 898 ntTSL 5 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL121694.1-201ENST00000554253 671 ntTSL 5 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC018552.1-201ENST00000562099 811 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 RBM22P13-201ENST00000569805 1244 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 RPL35AP25-201ENST00000584631 330 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL023806.2-201ENST00000603042 263 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL353729.2-201ENST00000605859 1249 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 BX649601.1-201ENST00000608264 572 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC015712.7-201ENST00000615211 635 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AL162574.1-201ENST00000615702 950 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 LDHAL6CP-202ENST00000550738 3224 ntBASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
CHKB-CPT1BH3BT56 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 NEK2P2-201ENST00000438441 1338 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 OR51H2P-202ENST00000641424 3046 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC012668.3-202ENST00000417485 1642 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC092681.1-201ENST00000297369 291 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC017079.1-201ENST00000333650 415 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 LELP1-201ENST00000368747 523 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 FABP9-201ENST00000379071 497 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AMELY-202ENST00000383036 621 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AL359643.1-201ENST00000404109 423 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AL357084.1-201ENST00000407538 454 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 MIR1271-201ENST00000408537 86 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 BMP2KL-201ENST00000414251 1225 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AL358452.1-201ENST00000414995 800 ntTSL 3 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC234781.4-201ENST00000419384 244 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 AL645936.2-201ENST00000430565 928 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 OR6R1P-201ENST00000431838 940 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 HMGN2P24-201ENST00000433516 273 ntBASIC3.23□□□□□ -1.89
CHKB-CPT1BH3BT56 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms