Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 AC099777.1-201ENST00000603779 1070 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC012640.3-201ENST00000607847 430 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC093635.1-201ENST00000609028 555 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC007786.3-201ENST00000615154 596 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC015712.7-201ENST00000615211 635 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AC138965.3-201ENST00000623875 498 ntBASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 TEX41-255ENST00000626404 610 ntTSL 5 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
RBFOX3A6NFN3 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC023886.2-201ENST00000321285 411 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 RNA5SP177-201ENST00000410122 107 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 RANP7-201ENST00000418085 644 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC117434.1-201ENST00000419971 836 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 REREP1Y-201ENST00000422655 198 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 CYP4F34P-201ENST00000425951 481 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AL596268.1-201ENST00000427910 1048 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AL136231.1-201ENST00000429407 730 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 FTO-202ENST00000431610 707 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 REREP2Y-201ENST00000439103 200 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 CUBNP2-201ENST00000443534 1139 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 LINC01431-203ENST00000452395 505 ntTSL 2 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AL928654.1-201ENST00000476081 354 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 RPL19P11-201ENST00000495944 589 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC027627.1-201ENST00000506895 753 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 GOLGA5P1-201ENST00000507317 980 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 SCARNA18.2-201ENST00000516882 84 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 IGHVII-49-1-201ENST00000521760 224 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 IGHVIII-25-1-201ENST00000522143 241 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC024145.1-201ENST00000535324 775 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AL359219.2-201ENST00000555184 348 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 DYNLRB2-204ENST00000562982 492 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC009852.2-201ENST00000567898 485 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 TXNP4-201ENST00000575018 310 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC016839.1-201ENST00000578162 867 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC068254.1-201ENST00000584753 483 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 Z99289.1-201ENST00000585373 807 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 IGKV2OR2-10-201ENST00000613976 311 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC245033.2-201ENST00000621893 421 ntTSL 3 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC099654.15-201ENST00000639802 509 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AL031595.2-201ENST00000624215 19071 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 AC024587.1-201ENST00000505925 2157 ntBASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC4.82□□□□□ -1.64
RBFOX3A6NFN3 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 116.3 ms