Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 MAPK10-344ENST00000641718 3746 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 MAPK10-383ENST00000642032 3390 ntBASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
TBC1D3FA6NER0 CLCA3P-203ENST00000490028 2781 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 ZNF559-ZNF177-202ENST00000446085 2470 ntTSL 5 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AP000641.1-201ENST00000531988 1639 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 TOPORSLP1-201ENST00000467693 2102 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AP000866.6-201ENST00000638898 3579 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 MROH3P-201ENST00000435735 2676 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AL513548.1-201ENST00000562904 1724 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 KCNJ13-202ENST00000409779 1099 ntTSL 2 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 RPS21P8-201ENST00000413365 247 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AJ239321.1-201ENST00000424255 564 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AL139415.1-201ENST00000424862 352 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AL158840.1-202ENST00000425754 694 ntTSL 3 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC094019.1-201ENST00000434678 472 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AL590762.3-201ENST00000436372 640 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AL139156.3-201ENST00000454802 394 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 Z83838.1-202ENST00000456225 839 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC009963.3-201ENST00000458090 486 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC091965.3-201ENST00000506236 208 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC009879.1-201ENST00000520029 839 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC012414.2-201ENST00000559474 187 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 RN7SL475P-201ENST00000583379 298 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC090616.1-201ENST00000583895 447 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 FAM60CP-201ENST00000591086 664 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 PLEKHA3P1-201ENST00000598554 894 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 OR7E91P-202ENST00000642062 1198 ntBASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
TBC1D3FA6NER0 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TBC1D3FA6NER0 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.4□□□□□ -1.39
TBC1D3FA6NER0 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TBC1D3FA6NER0 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TBC1D3FA6NER0 MEPE-203ENST00000424957 2022 ntAPPRIS P3 TSL 2 BASIC6.4□□□□□ -1.39
TBC1D3FA6NER0 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
TBC1D3FA6NER0 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.4□□□□□ -1.39
TBC1D3FA6NER0 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
TBC1D3FA6NER0 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TBC1D3FA6NER0 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC062022.1-201ENST00000451026 1684 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 SNORA77.2-201ENST00000408571 112 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AL512504.1-201ENST00000415494 778 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 RPL36P18-201ENST00000419316 318 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC079807.1-201ENST00000429993 481 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 LINC00390-201ENST00000432331 340 ntTSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 HMGN1P2-201ENST00000445197 310 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 MTND2P39-201ENST00000457230 764 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 RN7SL643P-201ENST00000471845 291 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC095052.1-201ENST00000509955 863 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC027309.1-201ENST00000519976 528 ntTSL 4 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC090115.2-201ENST00000548060 883 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 MTND2P17-201ENST00000550281 688 ntBASIC6.39□□□□□ -1.39
TBC1D3FA6NER0 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms