Protein–RNA interactions for Protein: Q9NPC3

CCNB1IP1, E3 ubiquitin-protein ligase CCNB1IP1, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB1IP1Q9NPC3 MRPL57P6-201ENST00000506570 309 ntBASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 RNA5SP96-201ENST00000516041 107 ntBASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AC021733.2-201ENST00000518830 497 ntBASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AC131935.1-201ENST00000524621 333 ntBASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AC036176.3-201ENST00000602456 418 ntBASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 RPL12P48-201ENST00000605620 304 ntBASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 AL121768.1-201ENST00000613917 2544 ntBASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC5.76□□□□□ -1.49
CCNB1IP1Q9NPC3 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 OFD1P8Y-201ENST00000449148 1433 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AK3-201ENST00000359883 1536 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 GLYATL1P1-201ENST00000528297 1607 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 RNA5SP140-201ENST00000364524 92 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 SNORA7A-201ENST00000384765 139 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 MIR433-201ENST00000384837 93 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC026310.1-201ENST00000396004 378 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 MIR1266-201ENST00000408125 84 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 OR5W1P-201ENST00000423705 938 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 IGLV3-4-201ENST00000432300 244 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 NPM1P23-201ENST00000440193 849 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC234771.4-201ENST00000441416 730 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 RPS3AP49-201ENST00000472161 790 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 RPL19P11-201ENST00000495944 589 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 RPS26P24-201ENST00000497656 331 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC094105.1-201ENST00000509745 560 ntTSL 4 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 RNU2-45P-201ENST00000516068 187 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 COX6B1P4-201ENST00000519826 484 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 VPS29-210ENST00000552130 1057 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC005519.1-201ENST00000554490 601 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AL162511.1-201ENST00000556542 879 ntTSL 4 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 OR4C49P-201ENST00000563891 900 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 CCDC58P1-201ENST00000578567 430 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 SNORD96A-201ENST00000606577 79 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 RAB28P4-201ENST00000622233 665 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 CLUHP10-201ENST00000631979 980 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 CASC19-260ENST00000641828 2001 ntBASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
CCNB1IP1Q9NPC3 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 PPIAP24-201ENST00000328558 471 ntBASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
CCNB1IP1Q9NPC3 RNU1-5P-201ENST00000362684 144 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms