Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
AMBRA1Q9C0C7 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
AMBRA1Q9C0C7 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.41
AMBRA1Q9C0C7 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
AMBRA1Q9C0C7 CASC19-255ENST00000641733 1385 ntBASIC6.21□□□□□ -1.41
AMBRA1Q9C0C7 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.21□□□□□ -1.41
AMBRA1Q9C0C7 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 FAM32BP-201ENST00000344033 333 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 RNA5SP188-201ENST00000362916 129 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 RN7SKP118-201ENST00000364331 330 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 IGHV2-26-201ENST00000390611 381 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AF228730.1-201ENST00000397972 663 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AL451046.1-201ENST00000406097 534 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 UBTFL2-201ENST00000411859 1191 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 ARAFP1-201ENST00000422172 605 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 LINC00328-2P-201ENST00000436585 219 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC092473.1-201ENST00000441098 221 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 RPS3AP15-201ENST00000483874 781 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 SNRPCP11-201ENST00000492453 205 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC105233.1-201ENST00000498840 781 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC093534.1-201ENST00000504977 132 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC090568.1-201ENST00000509499 856 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 DCAF13P2-201ENST00000514188 555 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 RBMS2P1-201ENST00000525031 1226 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 MTATP6P24-201ENST00000576835 677 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC009779.8-202ENST00000607990 932 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC097478.2-201ENST00000610572 514 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 AC026108.1-201ENST00000635444 547 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 DOCK11P1-201ENST00000553480 5932 ntBASIC6.21□□□□□ -1.42
AMBRA1Q9C0C7 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 GALNT11-201ENST00000415421 2555 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 PBX1-221ENST00000612123 6062 ntTSL 5 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 SNORA70.9-201ENST00000384370 135 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 MEG8-201ENST00000414488 800 ntTSL 3 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AL663061.1-201ENST00000416625 580 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 Z82198.3-201ENST00000421145 199 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 NPM1P26-201ENST00000426339 738 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC097721.1-201ENST00000427150 1253 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 KCND3-AS1-202ENST00000427471 583 ntTSL 3 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC114402.2-201ENST00000432760 643 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 MTCYBP11-201ENST00000447254 1109 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AL354714.5-201ENST00000450131 590 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 KF459542.1-201ENST00000450908 553 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 NPM1P17-201ENST00000479221 602 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 RPL10P7-201ENST00000495649 625 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC103833.1-201ENST00000517442 172 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 IGHVIII-25-1-201ENST00000522143 241 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 SOX5P1-201ENST00000524155 1127 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 OR4V1P-201ENST00000525394 1140 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC138207.8-204ENST00000579588 527 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 RN7SL66P-201ENST00000582099 264 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 MIR5682-201ENST00000584864 76 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC098847.2-201ENST00000588088 528 ntTSL 5 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AL078623.1-201ENST00000602702 907 ntBASIC6.2□□□□□ -1.42
AMBRA1Q9C0C7 AC023762.1-201ENST00000603280 584 ntBASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms