Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC023050.2-201ENST00000544968 387 ntBASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 LYZ-203ENST00000549690 669 ntTSL 2 BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 NQO1-205ENST00000561500 891 ntTSL 3 BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 RPS7P1-201ENST00000571702 585 ntBASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 AC015908.3-202ENST00000579367 457 ntTSL 2 BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 RN7SL667P-201ENST00000582817 298 ntBASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 PRR13P5-201ENST00000596581 442 ntBASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 AC024085.1-201ENST00000604299 432 ntBASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 AC092608.3-201ENST00000625017 386 ntBASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 OR7A1P-202ENST00000641542 1158 ntBASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 PYHIN1-204ENST00000392252 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
FOXP3Q9BZS1 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC010329.1-201ENST00000593903 8328 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 ZNF211-202ENST00000254182 1959 ntTSL 2 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 HERC4-211ENST00000492996 3385 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 UGT2B27P-201ENST00000505092 1620 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 SLC30A8-208ENST00000521243 1393 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AIG1-209ENST00000629020 3636 ntTSL 2 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 BCL2L14-201ENST00000266434 2039 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 FKBP5-202ENST00000536438 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 MC2R-201ENST00000327606 3656 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 HIST1H2BA-201ENST00000274764 516 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 OR1A1-201ENST00000304094 930 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 RN7SKP149-201ENST00000363008 344 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 RNA5SP172-201ENST00000365061 118 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 RNU6-207P-201ENST00000384137 107 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 Y_RNA.599-201ENST00000410489 109 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 TRGV6-201ENST00000417928 299 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 QRSL1P2-201ENST00000418582 964 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 OR5M12P-201ENST00000423388 929 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 GAPDHP69-201ENST00000425504 1008 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 Z99127.2-201ENST00000441426 334 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 SCDP1-201ENST00000455244 1081 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC115223.1-201ENST00000466377 870 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AL138787.2-201ENST00000466576 367 ntTSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC063943.2-201ENST00000495697 534 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 SMR3B-202ENST00000504825 489 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 FBXO16-208ENST00000519471 398 ntTSL 2 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC104009.1-201ENST00000528009 635 ntTSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC009167.1-201ENST00000568317 579 ntTSL 4 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC136443.4-201ENST00000568759 579 ntTSL 4 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC027796.1-201ENST00000575593 512 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 MIR378H-201ENST00000579966 83 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC063962.1-201ENST00000608199 521 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 IFNA5-201ENST00000610521 987 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC009283.1-201ENST00000615852 645 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC106782.7-201ENST00000624024 418 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC133555.5-201ENST00000624430 418 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC073488.7-201ENST00000633785 778 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 FRG1DP-201ENST00000635586 771 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 AC243725.1-201ENST00000637164 436 ntBASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 NCOA6-202ENST00000374796 9311 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC7.24□□□□□ -1.25
FOXP3Q9BZS1 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC7.23□□□□□ -1.25
FOXP3Q9BZS1 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
FOXP3Q9BZS1 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.23□□□□□ -1.25
FOXP3Q9BZS1 SCN1A-204ENST00000423058 8191 ntAPPRIS ALT1 TSL 1 (best) BASIC7.23□□□□□ -1.25
FOXP3Q9BZS1 AP002001.1-202ENST00000525797 1754 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
FOXP3Q9BZS1 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms