Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AL157777.1-201ENST00000468100 304 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC133644.2-201ENST00000608142 540 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC005839.1-201ENST00000624148 3213 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
IFT140Q96RY7 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 LY75-201ENST00000263636 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
IFT140Q96RY7 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
IFT140Q96RY7 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC114786.1-201ENST00000512892 1415 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 ESRG-201ENST00000583516 3140 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
IFT140Q96RY7 RNU1-106P-201ENST00000384382 164 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 HIGD1AP8-201ENST00000453927 274 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC072052.1-201ENST00000496556 306 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AC009656.1-201ENST00000531966 478 ntTSL 3 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 AL139099.4-201ENST00000614802 114 ntBASIC9.91□□□□□ -0.82
IFT140Q96RY7 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC9.91□□□□□ -0.82
IFT140Q96RY7 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
IFT140Q96RY7 SPHKAP-202ENST00000392056 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
IFT140Q96RY7 HIVEP3-202ENST00000372584 12319 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
IFT140Q96RY7 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
IFT140Q96RY7 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
IFT140Q96RY7 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC9.9□□□□□ -0.82
IFT140Q96RY7 VTA1-202ENST00000367630 7028 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
IFT140Q96RY7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC9.9□□□□□ -0.82
IFT140Q96RY7 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC9.9□□□□□ -0.82
IFT140Q96RY7 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
IFT140Q96RY7 AC009120.2-204ENST00000621548 2032 ntBASIC9.9□□□□□ -0.82
IFT140Q96RY7 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
IFT140Q96RY7 PRRG1-201ENST00000378628 4493 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
IFT140Q96RY7 UBN2-201ENST00000473989 14444 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
IFT140Q96RY7 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC9.9□□□□□ -0.83
IFT140Q96RY7 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC9.9□□□□□ -0.83
IFT140Q96RY7 CYP4F30P-202ENST00000420048 405 ntBASIC9.9□□□□□ -0.83
IFT140Q96RY7 AC008753.1-201ENST00000423096 284 ntBASIC9.9□□□□□ -0.83
IFT140Q96RY7 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC9.9□□□□□ -0.83
IFT140Q96RY7 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC9.9□□□□□ -0.83
IFT140Q96RY7 OR52B5P-201ENST00000435337 951 ntBASIC9.9□□□□□ -0.83
IFT140Q96RY7 RPS26P41-201ENST00000450370 284 ntBASIC9.9□□□□□ -0.83
IFT140Q96RY7 AC093890.1-201ENST00000502554 540 ntBASIC9.9□□□□□ -0.83
IFT140Q96RY7 RNA5SP400-201ENST00000517155 111 ntBASIC9.9□□□□□ -0.83
IFT140Q96RY7 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC9.9□□□□□ -0.83
IFT140Q96RY7 OR1F2P-201ENST00000570470 933 ntBASIC9.9□□□□□ -0.83
IFT140Q96RY7 AC139493.1-201ENST00000604368 397 ntBASIC9.9□□□□□ -0.83
IFT140Q96RY7 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC9.9□□□□□ -0.83
IFT140Q96RY7 OR52B5P-202ENST00000641118 1110 ntBASIC9.9□□□□□ -0.83
IFT140Q96RY7 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
IFT140Q96RY7 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
IFT140Q96RY7 AC112255.1-201ENST00000624070 2493 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 AC092821.3-202ENST00000641304 2767 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 CTNND1-205ENST00000399050 6313 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
IFT140Q96RY7 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC9.89□□□□□ -0.83
IFT140Q96RY7 HDAC1P2-201ENST00000453661 1398 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
IFT140Q96RY7 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
IFT140Q96RY7 OR7D2-201ENST00000344248 3224 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
IFT140Q96RY7 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
IFT140Q96RY7 AC007842.1-201ENST00000597336 2039 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
IFT140Q96RY7 RNA5SP131-201ENST00000365452 119 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 AL139128.1-201ENST00000413921 941 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 SOX9-AS1-202ENST00000414600 742 ntTSL 3 BASIC9.89□□□□□ -0.83
IFT140Q96RY7 RPS26P13-201ENST00000419030 330 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC9.89□□□□□ -0.83
IFT140Q96RY7 BX284632.1-201ENST00000478218 541 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 RPL7P39-201ENST00000481157 744 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 PGAM1P13-201ENST00000507497 754 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 AL049779.2-201ENST00000553847 315 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC9.89□□□□□ -0.83
IFT140Q96RY7 AC087763.1-201ENST00000603391 286 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 UNC79-206ENST00000621021 7377 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
IFT140Q96RY7 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC9.89□□□□□ -0.83
IFT140Q96RY7 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
IFT140Q96RY7 BIN2P1-201ENST00000504996 1530 ntBASIC9.89□□□□□ -0.83
IFT140Q96RY7 AP2B1-217ENST00000618940 3415 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
IFT140Q96RY7 VPS8-201ENST00000287546 5047 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
IFT140Q96RY7 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
IFT140Q96RY7 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
IFT140Q96RY7 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
IFT140Q96RY7 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC9.88□□□□□ -0.83
IFT140Q96RY7 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 AC107983.2-201ENST00000425211 4735 ntTSL 2 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 AC087516.1-201ENST00000561236 2428 ntBASIC9.88□□□□□ -0.83
IFT140Q96RY7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC9.88□□□□□ -0.83
IFT140Q96RY7 RPS4XP5-201ENST00000419038 768 ntBASIC9.88□□□□□ -0.83
IFT140Q96RY7 AL772161.1-201ENST00000439130 476 ntBASIC9.88□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms