Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
COL21A1Q96P44 USP9YP3-201ENST00000434481 1766 ntBASIC5.88□□□□□ -1.47
COL21A1Q96P44 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
COL21A1Q96P44 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL21A1Q96P44 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL21A1Q96P44 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL21A1Q96P44 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL21A1Q96P44 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 MIR433-201ENST00000384837 93 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL21A1Q96P44 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 RPL7AP51-201ENST00000422016 760 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 GTF2IP14-201ENST00000441415 586 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 RPS27AP3-201ENST00000453803 454 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 RN7SL643P-201ENST00000471845 291 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 RN7SL714P-201ENST00000487050 298 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 LINC01618-201ENST00000514957 727 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 SNORA74.1-201ENST00000516320 180 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AF117829.1-205ENST00000524190 383 ntTSL 3 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AP001000.1-201ENST00000526843 742 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 MT1CP-201ENST00000567054 174 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AC090651.1-201ENST00000567865 634 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 MIR3189-201ENST00000578735 73 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 IGKV2OR2-1-201ENST00000605129 304 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AC048341.3-201ENST00000619323 491 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 MIR6811-201ENST00000620409 58 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 AL122023.1-201ENST00000622847 530 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL21A1Q96P44 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
COL21A1Q96P44 LINC01613-201ENST00000561476 2780 ntBASIC5.87□□□□□ -1.47
COL21A1Q96P44 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
COL21A1Q96P44 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.87□□□□□ -1.47
COL21A1Q96P44 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 BMP10-201ENST00000295379 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 RNA5SP77-201ENST00000365394 120 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC121334.1-201ENST00000396414 802 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC007562.1-201ENST00000421819 517 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC013403.1-201ENST00000436954 263 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC096632.2-201ENST00000438139 1239 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 ARMC4P1-201ENST00000438905 707 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC023274.2-201ENST00000445264 521 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 snoU13.29-201ENST00000459370 104 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 RN7SL836P-201ENST00000476140 296 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 RPL29P23-201ENST00000486188 442 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 IGHV4-55-201ENST00000520889 368 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 KLRC1-204ENST00000536188 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC023906.3-201ENST00000559825 874 ntTSL 5 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
COL21A1Q96P44 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.86□□□□□ -1.47
COL21A1Q96P44 AP001267.4-201ENST00000602598 545 ntBASIC5.86□□□□□ -1.47
COL21A1Q96P44 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms