Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.57□□□□□ -1.36
CCDC42Q96M95 AC083837.1-201ENST00000565297 2994 ntBASIC6.57□□□□□ -1.36
CCDC42Q96M95 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
CCDC42Q96M95 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.57□□□□□ -1.36
CCDC42Q96M95 ZNF969P-201ENST00000510345 2341 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC42Q96M95 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC42Q96M95 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC42Q96M95 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 RNA5SP375-201ENST00000362975 119 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 MIR27A-201ENST00000385073 78 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 OR52N3P-201ENST00000413417 934 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 AC073410.1-201ENST00000435125 589 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 POU5F1P5-201ENST00000445059 658 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 AC093719.1-201ENST00000480427 441 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 ZSWIM7-209ENST00000486655 726 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 TOMM22P4-201ENST00000511318 336 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 AC244502.2-201ENST00000543361 851 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 AL512430.4-201ENST00000603085 613 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 AC012511.1-201ENST00000608140 449 ntBASIC6.56□□□□□ -1.36
CCDC42Q96M95 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC42Q96M95 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC42Q96M95 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC42Q96M95 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC42Q96M95 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC6.56□□□□□ -1.36
CCDC42Q96M95 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC42Q96M95 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CCDC42Q96M95 AC239868.2-201ENST00000564237 4527 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC004656.1-201ENST00000568479 4951 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC42Q96M95 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC42Q96M95 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC42Q96M95 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC003045.1-201ENST00000398779 713 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 AL033519.1-201ENST00000407266 307 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 RN7SKP17-201ENST00000411242 351 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 AK3P5-201ENST00000432033 519 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 CUBNP2-201ENST00000443534 1139 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 COX4I1P2-201ENST00000447446 547 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 NPM1P9-201ENST00000453156 844 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 CCDC11P1-201ENST00000503137 1162 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 snoU109.5-201ENST00000516231 132 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 MRPL45P2-203ENST00000573318 473 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 AL078624.2-201ENST00000605063 554 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC022106.1-201ENST00000612834 766 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 AC068213.1-201ENST00000625124 226 ntBASIC6.55□□□□□ -1.36
CCDC42Q96M95 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC42Q96M95 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC42Q96M95 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC42Q96M95 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
CCDC42Q96M95 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC42Q96M95 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
CCDC42Q96M95 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC42Q96M95 AL161756.3-201ENST00000641216 2071 ntBASIC6.54□□□□□ -1.36
CCDC42Q96M95 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC42Q96M95 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC42Q96M95 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC42Q96M95 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC42Q96M95 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC42Q96M95 AC011416.1-201ENST00000514947 1732 ntBASIC6.54□□□□□ -1.36
CCDC42Q96M95 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC42Q96M95 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.54□□□□□ -1.36
CCDC42Q96M95 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC42Q96M95 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.54□□□□□ -1.36
CCDC42Q96M95 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
CCDC42Q96M95 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
CCDC42Q96M95 RNA5SP346-201ENST00000363541 121 ntBASIC6.54□□□□□ -1.36
CCDC42Q96M95 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.54□□□□□ -1.36
CCDC42Q96M95 RN7SKP166-201ENST00000410812 305 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 148.5 ms