Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC4Q92889 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
ERCC4Q92889 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC4Q92889 SSX5-201ENST00000311798 1384 ntAPPRIS P4 TSL 5 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AC093844.1-201ENST00000514910 1361 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AC010624.4-201ENST00000597606 1351 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AL662795.2-201ENST00000624252 3706 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AC093297.3-201ENST00000607056 2517 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 PSMC1P6-201ENST00000477233 1319 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.36□□□□□ -1.23
ERCC4Q92889 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AC011815.2-201ENST00000618230 2021 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC4Q92889 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
ERCC4Q92889 RN7SKP130-201ENST00000364924 301 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 RNA5SP152-201ENST00000365184 110 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.36□□□□□ -1.23
ERCC4Q92889 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
ERCC4Q92889 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.36□□□□□ -1.23
ERCC4Q92889 OR13Z1P-201ENST00000416141 834 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 RPS10P21-201ENST00000430654 475 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AC116038.1-201ENST00000432250 408 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC4Q92889 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AC004470.1-201ENST00000442155 382 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC4Q92889 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC4Q92889 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC4Q92889 RPL21P42-201ENST00000488408 464 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AC105391.1-201ENST00000503155 1045 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AC098862.1-201ENST00000504991 413 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AC091917.1-201ENST00000506330 566 ntTSL 4 BASIC7.36□□□□□ -1.23
ERCC4Q92889 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC7.36□□□□□ -1.23
ERCC4Q92889 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC4Q92889 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC4Q92889 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC4Q92889 MTND1P24-201ENST00000552175 861 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC7.36□□□□□ -1.23
ERCC4Q92889 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC4Q92889 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC4Q92889 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC4Q92889 AC135178.4-201ENST00000585275 548 ntTSL 2 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AC004241.2-201ENST00000614562 444 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AP003789.1-201ENST00000617737 605 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AL445493.3-201ENST00000619568 477 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AP000943.4-201ENST00000622912 357 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 AC127071.2-201ENST00000623293 527 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 ASB8-218ENST00000629941 278 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.36□□□□□ -1.23
ERCC4Q92889 AL121936.2-201ENST00000641935 662 ntBASIC7.36□□□□□ -1.23
ERCC4Q92889 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC4Q92889 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
ERCC4Q92889 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC4Q92889 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
ERCC4Q92889 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC7.36□□□□□ -1.23
ERCC4Q92889 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.35□□□□□ -1.23
ERCC4Q92889 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC4Q92889 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC7.35□□□□□ -1.23
ERCC4Q92889 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 POLR1D-218ENST00000636817 4592 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC4Q92889 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC7.35□□□□□ -1.23
ERCC4Q92889 AKAP17BP-201ENST00000431706 2719 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AC095038.1-201ENST00000429248 1591 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC7.35□□□□□ -1.23
ERCC4Q92889 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 FAM32BP-201ENST00000344033 333 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 Y_RNA.62-201ENST00000362840 99 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 RNA5SP442-201ENST00000365050 107 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 TRAV35-201ENST00000390462 330 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC7.35□□□□□ -1.23
ERCC4Q92889 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC7.35□□□□□ -1.23
ERCC4Q92889 AL353692.2-201ENST00000407054 335 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AL023284.3-201ENST00000407767 334 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 HIBCH-207ENST00000410045 854 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC4Q92889 MEAF6P1-201ENST00000416092 327 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.35□□□□□ -1.23
ERCC4Q92889 AC009303.1-201ENST00000426307 352 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 NPM1P25-201ENST00000429734 854 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AC011242.1-201ENST00000433596 1158 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC4Q92889 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC7.35□□□□□ -1.23
ERCC4Q92889 OR52Y1P-201ENST00000452418 828 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 CLIC4P1-201ENST00000453177 535 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 RN7SL492P-201ENST00000460700 295 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 DEFB109A-201ENST00000482450 265 ntBASIC7.35□□□□□ -1.23
ERCC4Q92889 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC4Q92889 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC7.35□□□□□ -1.23
ERCC4Q92889 RPL7L1P7-201ENST00000509986 724 ntBASIC7.35□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms