Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
SNED1Q8TER0 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
SNED1Q8TER0 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNED1Q8TER0 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNED1Q8TER0 TTC3P1-201ENST00000399586 6081 ntBASIC7.4□□□□□ -1.22
SNED1Q8TER0 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNED1Q8TER0 SYTL5-202ENST00000456733 4704 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNED1Q8TER0 PRRC2C-201ENST00000338920 10355 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.22
SNED1Q8TER0 VCAN-202ENST00000342785 7154 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SNED1Q8TER0 SELENOWP1-201ENST00000322792 252 ntBASIC7.4□□□□□ -1.22
SNED1Q8TER0 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNED1Q8TER0 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNED1Q8TER0 RNU105B-201ENST00000364478 208 ntBASIC7.4□□□□□ -1.22
SNED1Q8TER0 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
SNED1Q8TER0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC7.4□□□□□ -1.22
SNED1Q8TER0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
SNED1Q8TER0 AC231760.1-201ENST00000498002 260 ntBASIC7.4□□□□□ -1.22
SNED1Q8TER0 AC110056.1-201ENST00000525759 911 ntBASIC7.4□□□□□ -1.22
SNED1Q8TER0 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC7.4□□□□□ -1.22
SNED1Q8TER0 FO393422.1-201ENST00000603908 708 ntBASIC7.4□□□□□ -1.22
SNED1Q8TER0 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
SNED1Q8TER0 AL731556.1-201ENST00000394628 3711 ntBASIC7.4□□□□□ -1.22
SNED1Q8TER0 BIN2P1-201ENST00000504996 1530 ntBASIC7.4□□□□□ -1.23
SNED1Q8TER0 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SNED1Q8TER0 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC7.4□□□□□ -1.23
SNED1Q8TER0 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.4□□□□□ -1.23
SNED1Q8TER0 HBS1L-212ENST00000527578 2618 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SNED1Q8TER0 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC7.4□□□□□ -1.23
SNED1Q8TER0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC7.4□□□□□ -1.23
SNED1Q8TER0 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC7.4□□□□□ -1.23
SNED1Q8TER0 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.23
SNED1Q8TER0 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
SNED1Q8TER0 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.23
SNED1Q8TER0 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SNED1Q8TER0 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SNED1Q8TER0 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
SNED1Q8TER0 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 ALG13-224ENST00000610588 4175 ntTSL 2 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 AP002370.1-201ENST00000528055 1602 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 CYP4F30P-202ENST00000420048 405 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 AC097721.1-201ENST00000427150 1253 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 AC108693.1-201ENST00000496068 432 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 AP005639.1-201ENST00000526939 192 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 OR6M2P-201ENST00000529831 871 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 AP001496.3-201ENST00000580230 913 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 RNU4ATAC-201ENST00000580972 127 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 OR7A1P-201ENST00000601206 970 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 AC020765.1-201ENST00000604296 328 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 AL021918.2-201ENST00000613415 194 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 AL589935.2-201ENST00000616471 1231 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 AL132640.3-201ENST00000630473 177 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 RPL14-201ENST00000338970 7072 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 ING3-204ENST00000431467 1447 ntTSL 2 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 LRRC37B-202ENST00000341671 3025 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 NFIB-218ENST00000636432 1953 ntTSL 5 BASIC7.39□□□□□ -1.23
SNED1Q8TER0 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 BRD7-202ENST00000394689 2145 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 TNPO1P2-201ENST00000426249 2665 ntBASIC7.39□□□□□ -1.23
SNED1Q8TER0 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
SNED1Q8TER0 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 AC092725.2-201ENST00000567658 1389 ntBASIC7.38□□□□□ -1.23
SNED1Q8TER0 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 AL590763.1-201ENST00000398297 1545 ntBASIC7.38□□□□□ -1.23
SNED1Q8TER0 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 HIVEP2-202ENST00000367603 9724 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 SPTLC1P2-201ENST00000407089 121 ntBASIC7.38□□□□□ -1.23
SNED1Q8TER0 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 NANOGP4-201ENST00000427230 913 ntBASIC7.38□□□□□ -1.23
SNED1Q8TER0 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 AC099786.1-201ENST00000446238 670 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
SNED1Q8TER0 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 AC114728.1-201ENST00000488289 483 ntBASIC7.38□□□□□ -1.23
SNED1Q8TER0 AC006499.3-201ENST00000506077 748 ntBASIC7.38□□□□□ -1.23
SNED1Q8TER0 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC7.38□□□□□ -1.23
SNED1Q8TER0 AC073916.1-201ENST00000545095 130 ntBASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms