Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 RAI14-208ENST00000506376 3091 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 ABI1-202ENST00000359188 3492 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 OR2A3P-202ENST00000641249 1776 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 OSGEPL1-204ENST00000519810 2216 ntTSL 2 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 ZBTB8OSP1-201ENST00000342688 498 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 Y_RNA.61-201ENST00000362835 102 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 RNU5A-2P-201ENST00000384337 116 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 NPFFR2-204ENST00000395999 1866 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 EIF4A1P5-201ENST00000428062 1095 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC129850.1-201ENST00000436203 508 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AL359263.1-201ENST00000441188 2796 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AL606490.8-201ENST00000441624 319 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AL138921.1-201ENST00000444359 846 ntTSL 5 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 PTGES3P5-201ENST00000455109 434 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 ANK3-207ENST00000460468 677 ntTSL 3 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AP005202.1-201ENST00000489915 867 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC073842.2-201ENST00000494221 572 ntTSL 4 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 RPL22-208ENST00000497965 786 ntTSL 2 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 EPHA6-204ENST00000502694 1582 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 FGB-207ENST00000509493 1164 ntTSL 5 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC096661.1-201ENST00000515870 822 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 RNU6-319P-201ENST00000516025 108 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 ARHGAP42P4-201ENST00000549782 2934 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AL109628.1-201ENST00000556877 366 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 IDH3A-223ENST00000561366 389 ntTSL 3 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC010547.2-201ENST00000568523 409 ntTSL 5 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC025283.1-201ENST00000572039 734 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 OR4G1P-201ENST00000588632 938 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 VN1R90P-201ENST00000595717 726 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 MTCYBP22-201ENST00000603788 447 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC104184.1-201ENST00000607513 721 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 PDCD6IPP1-202ENST00000622242 1064 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC112204.3-201ENST00000623822 332 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC005753.1-201ENST00000623837 618 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC008626.2-201ENST00000624425 248 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 AC005355.2-201ENST00000625064 484 ntBASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 HTT-201ENST00000355072 13474 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 LRMP-204ENST00000547044 2208 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
NEDD1Q8NHV4 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 SERPINB13-202ENST00000344731 3114 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 CNTRL-212ENST00000613863 2418 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 NBPF14-201ENST00000581201 2931 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 DHX32-202ENST00000368721 2389 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 FAM13A-218ENST00000511976 3579 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 ZIM3-201ENST00000269834 2627 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 GINS4-201ENST00000276533 3841 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 RN7SKP28-201ENST00000364770 305 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 MIR99A-201ENST00000384906 81 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 RN7SKP161-201ENST00000411110 305 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC245052.5-201ENST00000416320 649 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 MYO5BP2-201ENST00000449815 1277 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC009244.1-201ENST00000450566 258 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 OR52E3P-201ENST00000452083 936 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 UBDP1-202ENST00000457888 382 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 RPL6P9-201ENST00000466502 859 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC022730.1-201ENST00000473114 568 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 RPS7P11-201ENST00000484240 586 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 RN7SL849P-201ENST00000485236 295 ntBASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 AC092674.1-201ENST00000513871 571 ntTSL 4 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC8.32□□□□□ -1.08
NEDD1Q8NHV4 CARSP2-201ENST00000520688 277 ntBASIC8.32□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 82.1 ms