Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL445213.1-201ENST00000412589 747 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 PLA2G12AP2-201ENST00000424744 264 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 RPSAP40-201ENST00000442343 891 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 AL020997.1-201ENST00000446554 349 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC068491.1-201ENST00000449539 1241 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 RPL24-206ENST00000495401 478 ntTSL 2 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 PFN1P8-201ENST00000497012 543 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC105420.1-201ENST00000504389 582 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 HMGN1P16-201ENST00000508308 283 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC026956.1-201ENST00000558741 396 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC105243.1-201ENST00000563172 1165 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 GTF2IP6-201ENST00000583143 541 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC245052.7-201ENST00000601161 359 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 RNU6-84P-201ENST00000607737 102 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 Z98949.1-217ENST00000609275 994 ntTSL 5 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 Six3os1_4.1-201ENST00000615706 324 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 CNTNAP3P1-201ENST00000616657 906 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC131009.3-201ENST00000621809 287 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC004836.1-201ENST00000623032 634 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC073869.7-201ENST00000640874 297 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 AC005332.9-201ENST00000620266 2921 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
SCXQ7RTU7 COG2-209ENST00000534989 2963 ntTSL 2 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 RACGAP1P-201ENST00000550663 1879 ntBASIC4.2□□□□□ -1.74
SCXQ7RTU7 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC4.2□□□□□ -1.74
SCXQ7RTU7 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 EPB41L2-209ENST00000525193 2121 ntTSL 5 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC009120.2-204ENST00000621548 2032 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 Z97989.1-201ENST00000531702 2421 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 SNORD35A-201ENST00000363389 86 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AL391419.1-201ENST00000398901 1275 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 CYP2AC1P-201ENST00000407830 1173 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 RNA5SP115-201ENST00000411160 107 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
SCXQ7RTU7 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 OR13C7-201ENST00000424348 959 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 CRYGGP-201ENST00000443337 145 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC068759.1-201ENST00000447709 470 ntTSL 5 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC021006.1-201ENST00000489849 553 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 RN7SL362P-201ENST00000494228 267 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 RN7SKP248-201ENST00000516278 305 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 RNA5SP441-201ENST00000516809 88 ntBASIC4.19□□□□□ -1.74
SCXQ7RTU7 AC122713.1-201ENST00000518368 1015 ntBASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 884.1 ms