Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 AC012123.2-201ENST00000485809 248 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RN7SL518P-201ENST00000491887 280 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 HLTF-AS1-201ENST00000492461 415 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RN7SL776P-201ENST00000493390 268 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 HMGB1P47-201ENST00000511281 589 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC008906.1-201ENST00000512856 993 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 MTCYBP44-201ENST00000514835 823 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RNA5SP278-201ENST00000517055 102 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 SNORA76.2-201ENST00000517095 137 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC026407.1-201ENST00000518369 204 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 PHBP2-201ENST00000532859 806 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 OSBPL9P3-201ENST00000534523 595 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 VDAC2P2-201ENST00000544463 901 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 RN7SL270P-201ENST00000579643 281 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC025171.4-201ENST00000607250 1047 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC095038.2-201ENST00000621464 1070 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 CUL4AP1-201ENST00000514750 1863 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 MAPKAPK5P1-201ENST00000431810 1376 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 AC010624.4-201ENST00000597606 1351 ntBASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ATP10D-203ENST00000504445 2550 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
PTCHD4Q6ZW05 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AL929601.4-201ENST00000613011 1341 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 EEF1A1P16-201ENST00000325349 1414 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 RNA5SP350-201ENST00000363298 111 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 RNU12-2P-201ENST00000364789 156 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 TRAV22-201ENST00000390450 464 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 SNORA11D-201ENST00000408548 128 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 SNORA11E-201ENST00000408778 128 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 RNA5SP115-201ENST00000411160 107 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 TRIM60P17-201ENST00000415181 719 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC092570.3-201ENST00000420113 693 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 GAPDHP57-201ENST00000424400 585 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 ETF1P1-206ENST00000427296 984 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 H3F3BP1-201ENST00000440551 403 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC104162.1-204ENST00000443346 708 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 HGF-206ENST00000444829 1184 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 RPL23AP28-201ENST00000448062 470 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 CADM2-AS2-201ENST00000467225 768 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AL135933.1-201ENST00000498657 802 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC021146.11-201ENST00000503319 491 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 NAMPTP2-201ENST00000505629 1115 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC092435.1-202ENST00000512752 518 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC098487.1-203ENST00000512915 546 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 RNU6-334P-201ENST00000517072 102 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 IGLC4-201ENST00000517690 248 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC084337.1-201ENST00000524809 686 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 PDCL3P1-201ENST00000534575 734 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC140063.1-201ENST00000541343 259 ntBASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC6.03□□□□□ -1.44
PTCHD4Q6ZW05 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms