Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
NHLRC1Q6VVB1 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 RNU6-697P-201ENST00000363348 107 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 RN7SKP221-201ENST00000410420 301 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 PSMD8P1-201ENST00000436275 769 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AL034369.1-201ENST00000453808 477 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 RN7SL413P-201ENST00000482700 297 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 NACAP5-201ENST00000509863 636 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 RN7SKP67-201ENST00000515905 235 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AC008055.1-201ENST00000547032 609 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 IGLVIVOR22-1-201ENST00000603243 397 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AL589743.6-201ENST00000611025 117 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 GAPDHP41-201ENST00000613707 975 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 U1.34-201ENST00000618578 162 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 AP000550.3-201ENST00000637734 379 ntBASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
NHLRC1Q6VVB1 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 MTCO1P28-201ENST00000574177 1528 ntBASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC245036.1-201ENST00000391727 309 ntBASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 RAB9AP4-201ENST00000415230 609 ntBASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 RPL21P50-201ENST00000417698 477 ntBASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 RFESDP1-201ENST00000422350 461 ntBASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AL034379.1-201ENST00000423216 253 ntBASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 MRPS21P3-201ENST00000436696 262 ntBASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AL161722.1-201ENST00000446972 1032 ntBASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 PPIAP32-201ENST00000449940 472 ntBASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC5.69□□□□□ -1.5
NHLRC1Q6VVB1 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms