Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 AL133399.1-201ENST00000527476 298 ntBASIC6.83□□□□□ -1.32
TPM4P67936 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.83□□□□□ -1.32
TPM4P67936 LDHC-204ENST00000536880 957 ntTSL 5 BASIC6.83□□□□□ -1.32
TPM4P67936 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC6.83□□□□□ -1.32
TPM4P67936 AL136097.3-201ENST00000611097 505 ntBASIC6.83□□□□□ -1.32
TPM4P67936 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM4P67936 MIR6807-201ENST00000621968 92 ntBASIC6.83□□□□□ -1.32
TPM4P67936 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.83□□□□□ -1.32
TPM4P67936 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.83□□□□□ -1.32
TPM4P67936 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TPM4P67936 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.83□□□□□ -1.32
TPM4P67936 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
TPM4P67936 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
TPM4P67936 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.83□□□□□ -1.32
TPM4P67936 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.83□□□□□ -1.32
TPM4P67936 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TPM4P67936 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
TPM4P67936 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TPM4P67936 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
TPM4P67936 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
TPM4P67936 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
TPM4P67936 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
TPM4P67936 RN7SKP128-201ENST00000364270 303 ntBASIC6.82□□□□□ -1.32
TPM4P67936 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM4P67936 CDC42P6-201ENST00000421246 576 ntBASIC6.82□□□□□ -1.32
TPM4P67936 PTPN2P1-201ENST00000423212 1072 ntBASIC6.82□□□□□ -1.32
TPM4P67936 GAPDHP23-201ENST00000444823 993 ntBASIC6.82□□□□□ -1.32
TPM4P67936 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.82□□□□□ -1.32
TPM4P67936 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM4P67936 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.82□□□□□ -1.32
TPM4P67936 RPL23AP40-201ENST00000487630 390 ntBASIC6.82□□□□□ -1.32
TPM4P67936 ST13P12-201ENST00000508958 1094 ntBASIC6.82□□□□□ -1.32
TPM4P67936 AC093816.1-201ENST00000515076 913 ntBASIC6.82□□□□□ -1.32
TPM4P67936 AC136777.2-201ENST00000522979 358 ntBASIC6.82□□□□□ -1.32
TPM4P67936 AL358292.1-201ENST00000554181 412 ntTSL 2 BASIC6.82□□□□□ -1.32
TPM4P67936 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC6.82□□□□□ -1.32
TPM4P67936 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM4P67936 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.82□□□□□ -1.32
TPM4P67936 RPL7AP69-201ENST00000595306 806 ntBASIC6.82□□□□□ -1.32
TPM4P67936 OR7A8P-201ENST00000595427 913 ntBASIC6.82□□□□□ -1.32
TPM4P67936 AC025857.2-201ENST00000602711 238 ntBASIC6.82□□□□□ -1.32
TPM4P67936 AL121985.3-201ENST00000620690 523 ntBASIC6.82□□□□□ -1.32
TPM4P67936 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TPM4P67936 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
TPM4P67936 AC016583.1-201ENST00000624221 2431 ntBASIC6.82□□□□□ -1.32
TPM4P67936 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.82□□□□□ -1.32
TPM4P67936 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TPM4P67936 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TPM4P67936 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
TPM4P67936 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TPM4P67936 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM4P67936 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.81□□□□□ -1.32
TPM4P67936 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
TPM4P67936 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TPM4P67936 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TPM4P67936 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TPM4P67936 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TPM4P67936 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
TPM4P67936 RPL12P23-201ENST00000405880 490 ntBASIC6.81□□□□□ -1.32
TPM4P67936 SNORA77.2-201ENST00000408571 112 ntBASIC6.81□□□□□ -1.32
TPM4P67936 AL731684.1-201ENST00000415530 439 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM4P67936 E2F6P1-201ENST00000428850 745 ntBASIC6.81□□□□□ -1.32
TPM4P67936 EMC3-AS1-205ENST00000438698 534 ntBASIC6.81□□□□□ -1.32
TPM4P67936 AL592114.2-201ENST00000440142 532 ntBASIC6.81□□□□□ -1.32
TPM4P67936 E2F6P3-201ENST00000441743 743 ntBASIC6.81□□□□□ -1.32
TPM4P67936 CUBNP2-201ENST00000443534 1139 ntBASIC6.81□□□□□ -1.32
TPM4P67936 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.81□□□□□ -1.32
TPM4P67936 RPS3AP49-201ENST00000472161 790 ntBASIC6.81□□□□□ -1.32
TPM4P67936 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM4P67936 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.81□□□□□ -1.32
TPM4P67936 AL079303.1-201ENST00000486611 463 ntBASIC6.81□□□□□ -1.32
TPM4P67936 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.81□□□□□ -1.32
TPM4P67936 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.81□□□□□ -1.32
TPM4P67936 AC096661.1-201ENST00000515870 822 ntBASIC6.81□□□□□ -1.32
TPM4P67936 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.81□□□□□ -1.32
TPM4P67936 VPS37A-208ENST00000521005 479 ntTSL 3 BASIC6.81□□□□□ -1.32
TPM4P67936 DACT3-AS1-202ENST00000525008 496 ntTSL 2 BASIC6.81□□□□□ -1.32
TPM4P67936 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TPM4P67936 AC023080.1-201ENST00000551663 931 ntBASIC6.81□□□□□ -1.32
TPM4P67936 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.81□□□□□ -1.32
TPM4P67936 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.81□□□□□ -1.32
TPM4P67936 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.81□□□□□ -1.32
TPM4P67936 RPL29P33-201ENST00000587474 316 ntBASIC6.81□□□□□ -1.32
TPM4P67936 AL353807.4-201ENST00000604995 257 ntBASIC6.81□□□□□ -1.32
TPM4P67936 GMDS-AS1-215ENST00000606884 580 ntTSL 2 BASIC6.81□□□□□ -1.32
TPM4P67936 AC010998.3-201ENST00000613871 631 ntBASIC6.81□□□□□ -1.32
TPM4P67936 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM4P67936 DLST-216ENST00000626051 252 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM4P67936 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.81□□□□□ -1.32
TPM4P67936 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
TPM4P67936 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.81□□□□□ -1.32
TPM4P67936 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.81□□□□□ -1.32
TPM4P67936 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
TPM4P67936 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
TPM4P67936 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC6.81□□□□□ -1.32
TPM4P67936 ZNF969P-201ENST00000510345 2341 ntBASIC6.81□□□□□ -1.32
TPM4P67936 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.81□□□□□ -1.32
TPM4P67936 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
TPM4P67936 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
TPM4P67936 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms