Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 AC140479.4-205ENST00000636339 820 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS1BP61024 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 GOT2P1-201ENST00000440922 1309 ntBASIC4.41□□□□□ -1.7
CKS1BP61024 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC4.41□□□□□ -1.7
CKS1BP61024 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CKS1BP61024 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC4.41□□□□□ -1.7
CKS1BP61024 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CKS1BP61024 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CKS1BP61024 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CKS1BP61024 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CKS1BP61024 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.7
CKS1BP61024 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CKS1BP61024 ZNF806-201ENST00000438300 1774 ntBASIC4.4□□□□□ -1.7
CKS1BP61024 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
CKS1BP61024 AC105235.1-201ENST00000623208 1816 ntBASIC4.4□□□□□ -1.7
CKS1BP61024 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
CKS1BP61024 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
CKS1BP61024 GMFG-201ENST00000253054 616 ntTSL 5 BASIC4.4□□□□□ -1.71
CKS1BP61024 AL138847.1-201ENST00000258651 546 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 MGST2-201ENST00000265498 801 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CKS1BP61024 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
CKS1BP61024 SNORA38B-201ENST00000363524 131 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 RNA5SP114-201ENST00000363780 113 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 MTIF3-203ENST00000405591 889 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CKS1BP61024 TXNDC9-202ENST00000409434 1111 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CKS1BP61024 RNA5SP177-201ENST00000410122 107 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 RN7SKP268-201ENST00000411107 316 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 AP001468.1-201ENST00000415026 557 ntTSL 4 BASIC4.4□□□□□ -1.71
CKS1BP61024 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.4□□□□□ -1.71
CKS1BP61024 LINC01350-201ENST00000436955 642 ntTSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 AC012485.2-201ENST00000437372 982 ntTSL 5 BASIC4.4□□□□□ -1.71
CKS1BP61024 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 AC016396.1-201ENST00000440189 328 ntTSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 PRKAR1AP1-201ENST00000441422 1162 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 DBIL5P2-201ENST00000443827 253 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC4.4□□□□□ -1.71
CKS1BP61024 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC4.4□□□□□ -1.71
CKS1BP61024 RN7SL145P-201ENST00000469955 296 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CKS1BP61024 RPL21P6-201ENST00000479171 504 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 RPL7AP30-201ENST00000482859 796 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 MTCO1P55-201ENST00000489829 745 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 EIF3LP3-201ENST00000495197 822 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC4.4□□□□□ -1.71
CKS1BP61024 AC021146.11-201ENST00000503319 491 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 AC091849.1-201ENST00000509920 121 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 AC226119.1-201ENST00000514073 682 ntTSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 MTCYBP44-201ENST00000514835 823 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC4.4□□□□□ -1.71
CKS1BP61024 AC018953.1-201ENST00000523265 730 ntTSL 2 BASIC4.4□□□□□ -1.71
CKS1BP61024 AC090193.1-202ENST00000524355 566 ntTSL 4 BASIC4.4□□□□□ -1.71
CKS1BP61024 SNRPCP6-201ENST00000528310 210 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 OR8A2P-201ENST00000528631 952 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 OR4A43P-201ENST00000532938 908 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC4.4□□□□□ -1.71
CKS1BP61024 AL162632.2-201ENST00000553933 399 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 AC009269.5-201ENST00000557800 755 ntTSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 INO80-AS1-202ENST00000560178 444 ntTSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 AC091304.4-201ENST00000565703 620 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 MIR4472-2-201ENST00000582069 67 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 ZNF569-205ENST00000589833 762 ntTSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC4.4□□□□□ -1.71
CKS1BP61024 AC092032.1-201ENST00000603090 165 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 AC008833.1-201ENST00000611633 691 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 AL121890.2-201ENST00000617644 465 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 OR5G5P-204ENST00000627642 621 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC4.4□□□□□ -1.71
CKS1BP61024 S100Z-201ENST00000317593 1468 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
CKS1BP61024 DEUP1-209ENST00000531792 1656 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CKS1BP61024 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC4.4□□□□□ -1.71
CKS1BP61024 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CKS1BP61024 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.4□□□□□ -1.71
CKS1BP61024 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CKS1BP61024 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.4□□□□□ -1.71
CKS1BP61024 CNIH1-201ENST00000216416 4793 ntAPPRIS P2 TSL 1 (best) BASIC4.4□□□□□ -1.71
CKS1BP61024 AC083843.3-201ENST00000623679 2186 ntBASIC4.4□□□□□ -1.71
CKS1BP61024 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC4.39□□□□□ -1.71
CKS1BP61024 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC4.39□□□□□ -1.71
CKS1BP61024 RPS6KA6-201ENST00000262752 2547 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.39□□□□□ -1.71
CKS1BP61024 LINC01355-201ENST00000566551 5444 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
CKS1BP61024 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CKS1BP61024 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CKS1BP61024 AL138820.1-201ENST00000617901 5305 ntBASIC4.39□□□□□ -1.71
CKS1BP61024 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms