Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 AC094085.1-201ENST00000468914 584 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 AC091965.3-201ENST00000506236 208 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 RNU6-319P-201ENST00000516025 108 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC026616.1-201ENST00000523157 525 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 AC027369.2-201ENST00000528030 440 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 AP001858.2-201ENST00000536213 601 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.53□□□□□ -1.2
RHBDL3P58872 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC092332.1-201ENST00000563684 829 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC7.53□□□□□ -1.2
RHBDL3P58872 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC007346.1-201ENST00000569208 867 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.53□□□□□ -1.2
RHBDL3P58872 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC068768.2-201ENST00000602352 343 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 AL138895.2-201ENST00000603019 178 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 AC139493.1-201ENST00000604368 397 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 AC012467.1-201ENST00000607740 256 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 AC009120.7-201ENST00000623452 780 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC7.53□□□□□ -1.2
RHBDL3P58872 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC062029.1-202ENST00000606164 3651 ntBASIC7.53□□□□□ -1.2
RHBDL3P58872 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC7.53□□□□□ -1.2
RHBDL3P58872 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
RHBDL3P58872 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
RHBDL3P58872 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
RHBDL3P58872 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC7.53□□□□□ -1.2
RHBDL3P58872 AC011503.2-201ENST00000594230 1500 ntBASIC7.52□□□□□ -1.2
RHBDL3P58872 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC7.52□□□□□ -1.2
RHBDL3P58872 ERMARD-202ENST00000366772 2003 ntTSL 5 BASIC7.52□□□□□ -1.2
RHBDL3P58872 OAT-201ENST00000368845 2048 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
RHBDL3P58872 ZNF562-202ENST00000453372 2111 ntAPPRIS P3 TSL 3 BASIC7.52□□□□□ -1.2
RHBDL3P58872 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.2
RHBDL3P58872 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 AP003119.3-201ENST00000566747 4192 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
RHBDL3P58872 RNA5SP188-201ENST00000362916 129 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 RNU6-670P-201ENST00000364312 104 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 LCN1P2-201ENST00000372030 223 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC7.52□□□□□ -1.21
RHBDL3P58872 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
RHBDL3P58872 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC7.52□□□□□ -1.21
RHBDL3P58872 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC7.52□□□□□ -1.21
RHBDL3P58872 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
RHBDL3P58872 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.52□□□□□ -1.21
RHBDL3P58872 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC7.52□□□□□ -1.21
RHBDL3P58872 GAPDHP16-201ENST00000448152 962 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 NDUFA5P8-201ENST00000449019 346 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.52□□□□□ -1.21
RHBDL3P58872 SUMO2P4-201ENST00000504193 276 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC7.52□□□□□ -1.21
RHBDL3P58872 DCN-209ENST00000546745 1026 ntTSL 3 BASIC7.52□□□□□ -1.21
RHBDL3P58872 AC079905.1-201ENST00000549280 475 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.52□□□□□ -1.21
RHBDL3P58872 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 AL121839.1-201ENST00000556233 1185 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 AC011443.1-201ENST00000599484 365 ntTSL 3 BASIC7.52□□□□□ -1.21
RHBDL3P58872 AP001823.1-201ENST00000604056 1003 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 AL445647.2-201ENST00000615170 130 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.52□□□□□ -1.21
RHBDL3P58872 AC004801.6-201ENST00000616571 978 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 FAM27E2-201ENST00000619668 403 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC7.52□□□□□ -1.21
RHBDL3P58872 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC7.52□□□□□ -1.21
RHBDL3P58872 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 ESRRG-212ENST00000463665 3359 ntTSL 2 BASIC7.52□□□□□ -1.21
RHBDL3P58872 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC7.52□□□□□ -1.21
RHBDL3P58872 LPAL2-203ENST00000454031 2498 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 EEF1A1P21-201ENST00000512363 1344 ntBASIC7.52□□□□□ -1.21
RHBDL3P58872 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
RHBDL3P58872 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC7.51□□□□□ -1.21
RHBDL3P58872 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RHBDL3P58872 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RHBDL3P58872 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RHBDL3P58872 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RHBDL3P58872 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RHBDL3P58872 UGT3A1-207ENST00000625798 3097 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RHBDL3P58872 MAPK10-344ENST00000641718 3746 ntBASIC7.51□□□□□ -1.21
RHBDL3P58872 ALG10-201ENST00000266483 3128 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RHBDL3P58872 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
RHBDL3P58872 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RHBDL3P58872 LYPLA1P3-201ENST00000402650 695 ntBASIC7.51□□□□□ -1.21
RHBDL3P58872 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RHBDL3P58872 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC7.51□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 106.5 ms