Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 NUSAP1-202ENST00000414849 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 OR2T10-201ENST00000330500 1049 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
GFRA1P56159 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 RNU6-353P-201ENST00000364266 108 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 RN7SKP257-201ENST00000364525 309 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 MIR431-201ENST00000385266 114 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 SNORA40.2-201ENST00000390847 128 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 AL117344.1-201ENST00000407196 616 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 PRELID1P2-201ENST00000407805 396 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.54□□□□□ -1.36
GFRA1P56159 AL121781.1-201ENST00000419863 168 ntTSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 AL359633.1-201ENST00000421403 310 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 MTCO3P30-201ENST00000426425 670 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC6.54□□□□□ -1.36
GFRA1P56159 RPL14P5-201ENST00000436474 730 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 AC002542.1-201ENST00000440683 193 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.54□□□□□ -1.36
GFRA1P56159 RNU7-140P-201ENST00000459546 60 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 AC117395.2-201ENST00000463122 1128 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 RPL7AP30-201ENST00000482859 796 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 OR11I1P-201ENST00000486033 954 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 RN7SL306P-201ENST00000492941 296 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 CDH12P2-201ENST00000504393 298 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 LAMTOR3P2-201ENST00000504479 232 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC6.54□□□□□ -1.36
GFRA1P56159 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC6.54□□□□□ -1.36
GFRA1P56159 OR5AK3P-201ENST00000527486 1297 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 AC019209.3-201ENST00000536949 772 ntTSL 3 BASIC6.54□□□□□ -1.36
GFRA1P56159 ELOCP32-201ENST00000548625 324 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 AC126177.6-201ENST00000550420 1009 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 FCF1-203ENST00000553615 954 ntTSL 3 BASIC6.54□□□□□ -1.36
GFRA1P56159 NBEAP1-201ENST00000554452 979 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC6.54□□□□□ -1.36
GFRA1P56159 AADACP1-206ENST00000561502 1193 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 AC090826.1-201ENST00000564109 915 ntTSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 EEF1B2P1-201ENST00000567221 672 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 AC006441.4-202ENST00000577621 510 ntTSL 3 BASIC6.54□□□□□ -1.36
GFRA1P56159 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 AL158163.2-201ENST00000619110 700 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 AC068792.1-201ENST00000621354 417 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 AC079248.2-201ENST00000623779 326 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 AC093909.6-201ENST00000624757 775 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 AL009031.1-201ENST00000632346 1026 ntTSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 OR7E161P-202ENST00000641994 1033 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 PEX19-201ENST00000368072 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 GREM1-203ENST00000622074 14606 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 SCN9A-202ENST00000409435 5967 ntAPPRIS ALT1 TSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 MAPK10-377ENST00000642006 2752 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 SLC7A14-201ENST00000231706 10103 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 MT-CO1-201ENST00000361624 1542 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
GFRA1P56159 TRIM53CP-201ENST00000531490 1354 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 SLC7A6-209ENST00000566454 6308 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 NXF2B-202ENST00000602195 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 NXF2-202ENST00000625106 2337 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
GFRA1P56159 ACOD1-201ENST00000377462 2165 ntAPPRIS P2 TSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
GFRA1P56159 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 AC104581.5-201ENST00000624171 7141 ntBASIC6.54□□□□□ -1.36
GFRA1P56159 E2F8-201ENST00000250024 3240 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
GFRA1P56159 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.53□□□□□ -1.36
GFRA1P56159 LNPEP-202ENST00000395770 3888 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC6.53□□□□□ -1.36
GFRA1P56159 ZNF542P-204ENST00000482727 1305 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.53□□□□□ -1.36
GFRA1P56159 CDC73-204ENST00000635846 3987 ntTSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC6.53□□□□□ -1.36
GFRA1P56159 ZNF840P-201ENST00000504759 1996 ntBASIC6.53□□□□□ -1.36
GFRA1P56159 AC002384.1-203ENST00000602761 3049 ntTSL 3 BASIC6.53□□□□□ -1.36
GFRA1P56159 SLC39A12-203ENST00000377374 2639 ntAPPRIS P3 TSL 2 BASIC6.53□□□□□ -1.36
GFRA1P56159 ADGRA3-209ENST00000508133 1572 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 PRLR-219ENST00000619676 1402 ntTSL 5 BASIC6.53□□□□□ -1.36
GFRA1P56159 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 AC113615.1-201ENST00000507424 4121 ntTSL 2 BASIC6.53□□□□□ -1.36
GFRA1P56159 ABCA9-201ENST00000340001 6514 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
GFRA1P56159 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
GFRA1P56159 Y_RNA.51-201ENST00000362725 102 ntBASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms