Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 UTP6-201ENST00000261708 4392 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SUMO3P55854 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SUMO3P55854 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SUMO3P55854 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SUMO3P55854 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SUMO3P55854 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
SUMO3P55854 RN7SKP191-201ENST00000364713 306 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 RNA5SP442-201ENST00000365050 107 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
SUMO3P55854 AC008171.1-201ENST00000395058 200 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC6.12□□□□□ -1.43
SUMO3P55854 OR13Z1P-201ENST00000416141 834 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
SUMO3P55854 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC6.12□□□□□ -1.43
SUMO3P55854 AC006065.1-201ENST00000422539 802 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 MTCO1P43-201ENST00000431831 488 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 HSPD1P14-201ENST00000432666 1618 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 Z80107.1-201ENST00000436830 412 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC6.12□□□□□ -1.43
SUMO3P55854 AC004854.1-201ENST00000440356 349 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 BMS1P11-201ENST00000442351 885 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SUMO3P55854 PFN1P11-201ENST00000445829 389 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 LRRC69-202ENST00000448384 1044 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.12□□□□□ -1.43
SUMO3P55854 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC6.12□□□□□ -1.43
SUMO3P55854 BMS1P9-201ENST00000457640 885 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 RN7SL372P-201ENST00000461982 298 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 UOX-201ENST00000471089 899 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 AC104982.1-201ENST00000478775 574 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 AC098583.1-201ENST00000480875 255 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 RN7SL423P-201ENST00000486202 304 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SUMO3P55854 MTERF4-220ENST00000495694 909 ntTSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 PRELID3BP6-201ENST00000503839 571 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.12□□□□□ -1.43
SUMO3P55854 AL390198.2-201ENST00000510553 222 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 NARS2-204ENST00000528850 2137 ntTSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.12□□□□□ -1.43
SUMO3P55854 CCDC150P1-201ENST00000537123 2215 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 ZKSCAN7P1-201ENST00000543668 673 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 AC089984.3-201ENST00000552838 363 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC6.12□□□□□ -1.43
SUMO3P55854 ANP32BP1-202ENST00000568553 737 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC6.12□□□□□ -1.43
SUMO3P55854 RPS11-205ENST00000599561 430 ntTSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.12□□□□□ -1.43
SUMO3P55854 RPS4XP21-201ENST00000603814 750 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 AL137000.1-201ENST00000610528 1244 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 RNU6-1192P-201ENST00000612197 107 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 RNU6-489P-201ENST00000618289 107 ntBASIC6.12□□□□□ -1.43
SUMO3P55854 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.12□□□□□ -1.43
SUMO3P55854 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SUMO3P55854 NRP1-205ENST00000374823 3737 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SUMO3P55854 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.12□□□□□ -1.43
SUMO3P55854 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC6.12□□□□□ -1.43
SUMO3P55854 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC6.12□□□□□ -1.43
SUMO3P55854 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.12□□□□□ -1.43
SUMO3P55854 LINC-ROR-201ENST00000553704 2603 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
SUMO3P55854 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC6.11□□□□□ -1.43
SUMO3P55854 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
SUMO3P55854 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 RACGAP1P-201ENST00000550663 1879 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 LARS-212ENST00000510191 3737 ntTSL 2 BASIC6.11□□□□□ -1.43
SUMO3P55854 BEST3-202ENST00000330891 3532 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 AC007485.2-201ENST00000623493 1667 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.11□□□□□ -1.43
SUMO3P55854 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 SAR1A-206ENST00000431664 2810 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 AL512353.3-201ENST00000417517 1326 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SUMO3P55854 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SUMO3P55854 RNA5SP321-201ENST00000362722 111 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
SUMO3P55854 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
SUMO3P55854 NOX1-203ENST00000372964 661 ntTSL 2 BASIC6.11□□□□□ -1.43
SUMO3P55854 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
SUMO3P55854 AC019178.1-201ENST00000392337 440 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 RPL22P22-201ENST00000395439 379 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC6.11□□□□□ -1.43
SUMO3P55854 AL049697.3-201ENST00000406493 982 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AL158825.1-201ENST00000414735 521 ntBASIC6.11□□□□□ -1.43
SUMO3P55854 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.11□□□□□ -1.43
SUMO3P55854 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.11□□□□□ -1.43
SUMO3P55854 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 149.4 ms