Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC027279.1-201ENST00000568885 4284 ntBASIC5.44□□□□□ -1.54
HCFC1P51610 OR9K1P-201ENST00000326513 941 ntBASIC5.44□□□□□ -1.54
HCFC1P51610 RNU1-46P-201ENST00000384425 164 ntBASIC5.44□□□□□ -1.54
HCFC1P51610 RNA5SP284-201ENST00000384547 118 ntBASIC5.44□□□□□ -1.54
HCFC1P51610 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC5.44□□□□□ -1.54
HCFC1P51610 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.44□□□□□ -1.54
HCFC1P51610 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC5.44□□□□□ -1.54
HCFC1P51610 LINC02218-201ENST00000503267 529 ntTSL 2 BASIC5.44□□□□□ -1.54
HCFC1P51610 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC5.44□□□□□ -1.54
HCFC1P51610 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.44□□□□□ -1.54
HCFC1P51610 AP004607.6-201ENST00000525033 1202 ntBASIC5.44□□□□□ -1.54
HCFC1P51610 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC5.44□□□□□ -1.54
HCFC1P51610 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.44□□□□□ -1.54
HCFC1P51610 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.44□□□□□ -1.54
HCFC1P51610 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.44□□□□□ -1.54
HCFC1P51610 AC135626.1-201ENST00000556983 435 ntBASIC5.44□□□□□ -1.54
HCFC1P51610 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
HCFC1P51610 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC5.44□□□□□ -1.54
HCFC1P51610 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCFC1P51610 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCFC1P51610 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC5.44□□□□□ -1.54
HCFC1P51610 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCFC1P51610 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC5.44□□□□□ -1.54
HCFC1P51610 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC5.44□□□□□ -1.54
HCFC1P51610 EPHA3-201ENST00000336596 5809 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCFC1P51610 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HCFC1P51610 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HCFC1P51610 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCFC1P51610 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC5.44□□□□□ -1.54
HCFC1P51610 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HCFC1P51610 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HCFC1P51610 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCFC1P51610 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
HCFC1P51610 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC5.43□□□□□ -1.54
HCFC1P51610 ASCC1-203ENST00000342444 2270 ntTSL 2 BASIC5.43□□□□□ -1.54
HCFC1P51610 AC005332.9-201ENST00000620266 2921 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 OR13C1P-202ENST00000641378 2919 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 DCX-208ENST00000636035 9269 ntAPPRIS ALT1 TSL 2 BASIC5.43□□□□□ -1.54
HCFC1P51610 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 RN7SKP278-201ENST00000410504 342 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 GAPDHP23-201ENST00000444823 993 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 CETN3-206ENST00000522864 738 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.43□□□□□ -1.54
HCFC1P51610 PRELID3BP3-201ENST00000584963 545 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC5.43□□□□□ -1.54
HCFC1P51610 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC5.43□□□□□ -1.54
HCFC1P51610 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
HCFC1P51610 MAPK10-287ENST00000641217 3037 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 AP005131.1-201ENST00000585366 4745 ntTSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 ZNF181-204ENST00000492450 5086 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 AF287957.1-201ENST00000607368 1595 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
HCFC1P51610 SNORA21-201ENST00000362423 132 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HCFC1P51610 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 AC023141.3-201ENST00000436698 278 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 PSMA2P2-201ENST00000504319 686 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 AC008945.1-201ENST00000505144 499 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 Y_RNA.710-201ENST00000516975 110 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 AC022826.1-201ENST00000519383 805 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.43□□□□□ -1.54
HCFC1P51610 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.43□□□□□ -1.54
HCFC1P51610 LAMTOR5-207ENST00000602858 553 ntTSL 2 BASIC5.43□□□□□ -1.54
HCFC1P51610 AC022106.1-201ENST00000612834 766 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 AC005393.1-201ENST00000617916 584 ntBASIC5.43□□□□□ -1.54
HCFC1P51610 CCDC93-201ENST00000319432 6896 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 CCDC93-202ENST00000376300 6899 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 MR1-209ENST00000617803 7584 ntTSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
HCFC1P51610 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
HCFC1P51610 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC5.43□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 95.6 ms