Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AC005725.1-201ENST00000577346 2607 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC7.63□□□□□ -1.19
MRE11P49959 RNU4-81P-201ENST00000363561 144 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AL050335.1-201ENST00000396909 869 ntBASIC7.63□□□□□ -1.19
MRE11P49959 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.63□□□□□ -1.19
MRE11P49959 RN7SKP240-201ENST00000410583 375 ntBASIC7.63□□□□□ -1.19
MRE11P49959 RN7SKP205-201ENST00000410999 307 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AC002127.1-201ENST00000421305 225 ntBASIC7.63□□□□□ -1.19
MRE11P49959 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MRE11P49959 PUDPP2-201ENST00000431423 643 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC7.63□□□□□ -1.19
MRE11P49959 AC114878.1-201ENST00000441166 358 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC7.63□□□□□ -1.19
MRE11P49959 SRP68P2-201ENST00000456184 254 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 NDUFA5P5-201ENST00000468361 342 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AC126615.1-201ENST00000470084 630 ntBASIC7.63□□□□□ -1.19
MRE11P49959 RN7SL392P-201ENST00000473024 299 ntBASIC7.63□□□□□ -1.19
MRE11P49959 RN7SL518P-201ENST00000491887 280 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AC010374.2-201ENST00000512933 535 ntBASIC7.63□□□□□ -1.19
MRE11P49959 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 AC011333.1-201ENST00000520587 436 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 AC103974.1-201ENST00000527285 874 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC7.63□□□□□ -1.19
MRE11P49959 AC073916.1-201ENST00000545095 130 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC7.63□□□□□ -1.19
MRE11P49959 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 AC011595.1-201ENST00000548901 753 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 AL132657.2-201ENST00000564417 358 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC7.63□□□□□ -1.19
MRE11P49959 DNAJC19P3-201ENST00000594491 331 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AC012358.3-204ENST00000599475 978 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC7.63□□□□□ -1.19
MRE11P49959 AC122710.3-201ENST00000606566 541 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AC093388.1-201ENST00000609166 430 ntBASIC7.63□□□□□ -1.19
MRE11P49959 AP000577.1-201ENST00000624366 878 ntBASIC7.63□□□□□ -1.19
MRE11P49959 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC7.63□□□□□ -1.19
MRE11P49959 AL157831.2-201ENST00000564681 3095 ntBASIC7.63□□□□□ -1.19
MRE11P49959 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MRE11P49959 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.63□□□□□ -1.19
MRE11P49959 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC7.63□□□□□ -1.19
MRE11P49959 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC7.63□□□□□ -1.19
MRE11P49959 ANGPT1-206ENST00000520734 1526 ntTSL 2 BASIC7.62□□□□□ -1.19
MRE11P49959 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
MRE11P49959 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC7.62□□□□□ -1.19
MRE11P49959 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
MRE11P49959 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
MRE11P49959 FBXO3-209ENST00000531080 1448 ntTSL 2 BASIC7.62□□□□□ -1.19
MRE11P49959 KARSP1-201ENST00000451871 1752 ntBASIC7.62□□□□□ -1.19
MRE11P49959 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC7.62□□□□□ -1.19
MRE11P49959 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC7.62□□□□□ -1.19
MRE11P49959 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
MRE11P49959 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC7.62□□□□□ -1.19
MRE11P49959 AL133260.1-201ENST00000405720 405 ntBASIC7.62□□□□□ -1.19
MRE11P49959 RN7SKP85-201ENST00000411349 318 ntBASIC7.62□□□□□ -1.19
MRE11P49959 Z93019.1-201ENST00000416450 973 ntBASIC7.62□□□□□ -1.19
MRE11P49959 AC134879.1-201ENST00000426062 394 ntBASIC7.62□□□□□ -1.19
MRE11P49959 AC115283.1-201ENST00000427353 400 ntBASIC7.62□□□□□ -1.19
MRE11P49959 HNRNPA1P18-201ENST00000433537 927 ntBASIC7.62□□□□□ -1.19
MRE11P49959 CFAP58-AS1-201ENST00000435434 795 ntTSL 2 BASIC7.62□□□□□ -1.19
MRE11P49959 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.62□□□□□ -1.19
MRE11P49959 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC7.62□□□□□ -1.19
MRE11P49959 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC7.62□□□□□ -1.19
MRE11P49959 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC7.62□□□□□ -1.19
MRE11P49959 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.62□□□□□ -1.19
MRE11P49959 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
MRE11P49959 AC090058.1-201ENST00000498788 435 ntBASIC7.62□□□□□ -1.19
MRE11P49959 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.62□□□□□ -1.19
MRE11P49959 AC010460.2-201ENST00000509054 677 ntBASIC7.62□□□□□ -1.19
MRE11P49959 MTATP6P9-201ENST00000515039 680 ntBASIC7.62□□□□□ -1.19
MRE11P49959 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC7.62□□□□□ -1.19
MRE11P49959 AC025857.1-201ENST00000525252 377 ntBASIC7.62□□□□□ -1.19
MRE11P49959 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC7.62□□□□□ -1.19
MRE11P49959 RPS27AP19-201ENST00000597285 458 ntBASIC7.62□□□□□ -1.19
MRE11P49959 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC7.62□□□□□ -1.19
MRE11P49959 AC063944.3-201ENST00000609969 533 ntBASIC7.62□□□□□ -1.19
MRE11P49959 AL391834.2-201ENST00000609982 546 ntBASIC7.62□□□□□ -1.19
MRE11P49959 uc_338.29-201ENST00000615099 168 ntBASIC7.62□□□□□ -1.19
MRE11P49959 HOTTIP_2.1-201ENST00000616633 376 ntBASIC7.62□□□□□ -1.19
MRE11P49959 AC022960.3-201ENST00000619794 441 ntBASIC7.62□□□□□ -1.19
MRE11P49959 uc_338.37-201ENST00000620113 186 ntBASIC7.62□□□□□ -1.19
MRE11P49959 RAB28P4-201ENST00000622233 665 ntBASIC7.62□□□□□ -1.19
MRE11P49959 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.62□□□□□ -1.19
MRE11P49959 AC004808.2-201ENST00000627965 773 ntBASIC7.62□□□□□ -1.19
MRE11P49959 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC7.62□□□□□ -1.19
MRE11P49959 MIR665-201ENST00000635949 72 ntBASIC7.62□□□□□ -1.19
MRE11P49959 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC7.62□□□□□ -1.19
MRE11P49959 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.62□□□□□ -1.19
MRE11P49959 CREM-217ENST00000439705 2306 ntTSL 5 BASIC7.62□□□□□ -1.19
MRE11P49959 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC7.62□□□□□ -1.19
MRE11P49959 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
MRE11P49959 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC7.62□□□□□ -1.19
MRE11P49959 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
MRE11P49959 AC087516.1-201ENST00000561236 2428 ntBASIC7.61□□□□□ -1.19
MRE11P49959 NR1H5P-201ENST00000452683 1377 ntBASIC7.61□□□□□ -1.19
MRE11P49959 AC140134.1-201ENST00000511830 3544 ntBASIC7.61□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 86.7 ms