Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AC095038.2-201ENST00000621464 1070 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AC006328.2-201ENST00000623198 397 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AC012005.2-201ENST00000624333 397 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AC114546.4-201ENST00000624413 369 ntBASIC5.72□□□□□ -1.49
SOX2P48431 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SOX2P48431 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX2P48431 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX2P48431 TCF12-213ENST00000559703 1544 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 AC011504.1-201ENST00000623331 4103 ntBASIC5.72□□□□□ -1.49
SOX2P48431 CCAT2-201ENST00000630920 1752 ntBASIC5.72□□□□□ -1.49
SOX2P48431 ATG12-202ENST00000500945 1430 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SOX2P48431 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
SOX2P48431 AC011815.2-201ENST00000618230 2021 ntBASIC5.72□□□□□ -1.49
SOX2P48431 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SOX2P48431 AC006600.2-201ENST00000624834 2506 ntBASIC5.72□□□□□ -1.49
SOX2P48431 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC5.72□□□□□ -1.49
SOX2P48431 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.71□□□□□ -1.49
SOX2P48431 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SOX2P48431 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SOX2P48431 AC137056.2-201ENST00000624055 1958 ntBASIC5.71□□□□□ -1.49
SOX2P48431 BCL2L14-203ENST00000308721 1897 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 BX284613.1-201ENST00000452221 1641 ntBASIC5.71□□□□□ -1.5
SOX2P48431 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 AL078595.2-201ENST00000605309 1780 ntBASIC5.71□□□□□ -1.5
SOX2P48431 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SOX2P48431 RN7SKP237-201ENST00000364663 301 ntBASIC5.71□□□□□ -1.5
SOX2P48431 FKBP1A-203ENST00000381724 976 ntTSL 2 BASIC5.71□□□□□ -1.5
SOX2P48431 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SOX2P48431 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.71□□□□□ -1.5
SOX2P48431 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 MORF4L1P7-201ENST00000426038 703 ntBASIC5.71□□□□□ -1.5
SOX2P48431 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC5.71□□□□□ -1.5
SOX2P48431 LINC00687-201ENST00000427835 558 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 AC114973.1-201ENST00000429057 632 ntBASIC5.71□□□□□ -1.5
SOX2P48431 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC5.71□□□□□ -1.5
SOX2P48431 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 DMD-AS3-201ENST00000439592 293 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.71□□□□□ -1.5
SOX2P48431 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC5.71□□□□□ -1.5
SOX2P48431 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 RN7SL492P-201ENST00000460700 295 ntBASIC5.71□□□□□ -1.5
SOX2P48431 RN7SL165P-201ENST00000477476 291 ntBASIC5.71□□□□□ -1.5
SOX2P48431 EIF4E2P2-201ENST00000492033 736 ntBASIC5.71□□□□□ -1.5
SOX2P48431 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SOX2P48431 AK4P6-201ENST00000505168 528 ntBASIC5.71□□□□□ -1.5
SOX2P48431 NAMPTP2-201ENST00000505629 1115 ntBASIC5.71□□□□□ -1.5
SOX2P48431 AC091965.3-201ENST00000506236 208 ntBASIC5.71□□□□□ -1.5
SOX2P48431 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC5.71□□□□□ -1.5
SOX2P48431 AP001372.4-201ENST00000524889 472 ntBASIC5.71□□□□□ -1.5
SOX2P48431 C1DP5-201ENST00000525775 383 ntBASIC5.71□□□□□ -1.5
SOX2P48431 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SOX2P48431 AC069234.3-201ENST00000544939 569 ntTSL 4 BASIC5.71□□□□□ -1.5
SOX2P48431 AC069240.2-201ENST00000550242 609 ntBASIC5.71□□□□□ -1.5
SOX2P48431 TGFB3-AS1-201ENST00000553732 580 ntTSL 4 BASIC5.71□□□□□ -1.5
SOX2P48431 AL445383.1-201ENST00000554689 874 ntBASIC5.71□□□□□ -1.5
SOX2P48431 YWHAZP1-201ENST00000556286 722 ntBASIC5.71□□□□□ -1.5
SOX2P48431 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 MIR4685-201ENST00000578185 69 ntBASIC5.71□□□□□ -1.5
SOX2P48431 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 AC008734.1-201ENST00000594006 537 ntTSL 2 BASIC5.71□□□□□ -1.5
SOX2P48431 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 AC004775.1-201ENST00000607389 753 ntBASIC5.71□□□□□ -1.5
SOX2P48431 AC004477.3-201ENST00000614061 590 ntBASIC5.71□□□□□ -1.5
SOX2P48431 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC5.71□□□□□ -1.5
SOX2P48431 AC068880.4-201ENST00000623082 495 ntBASIC5.71□□□□□ -1.5
SOX2P48431 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC5.71□□□□□ -1.5
SOX2P48431 AL132640.3-201ENST00000630473 177 ntBASIC5.71□□□□□ -1.5
SOX2P48431 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.71□□□□□ -1.5
SOX2P48431 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC5.71□□□□□ -1.5
SOX2P48431 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SOX2P48431 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 OR10AB1P-202ENST00000641219 1686 ntBASIC5.71□□□□□ -1.5
SOX2P48431 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.71□□□□□ -1.5
SOX2P48431 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC5.71□□□□□ -1.5
SOX2P48431 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
SOX2P48431 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.71□□□□□ -1.5
SOX2P48431 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SOX2P48431 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.71□□□□□ -1.5
SOX2P48431 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
SOX2P48431 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.71□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 137.4 ms