Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 RBMY2BP-202ENST00000451071 1156 ntBASIC7.2□□□□□ -1.26
NEDD4P46934 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC7.2□□□□□ -1.26
NEDD4P46934 AC008957.1-202ENST00000512329 681 ntTSL 3 BASIC7.2□□□□□ -1.26
NEDD4P46934 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC7.2□□□□□ -1.26
NEDD4P46934 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.2□□□□□ -1.26
NEDD4P46934 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.2□□□□□ -1.26
NEDD4P46934 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC7.2□□□□□ -1.26
NEDD4P46934 AC092332.1-201ENST00000563684 829 ntBASIC7.2□□□□□ -1.26
NEDD4P46934 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC7.2□□□□□ -1.26
NEDD4P46934 STARD6-202ENST00000577499 696 ntTSL 2 BASIC7.2□□□□□ -1.26
NEDD4P46934 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
NEDD4P46934 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC7.2□□□□□ -1.26
NEDD4P46934 AC092681.3-201ENST00000609463 678 ntBASIC7.2□□□□□ -1.26
NEDD4P46934 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.2□□□□□ -1.26
NEDD4P46934 AL162377.2-201ENST00000624532 337 ntBASIC7.2□□□□□ -1.26
NEDD4P46934 AL357562.1-201ENST00000624911 609 ntBASIC7.2□□□□□ -1.26
NEDD4P46934 AC116667.2-201ENST00000641075 823 ntBASIC7.2□□□□□ -1.26
NEDD4P46934 COLCA1-205ENST00000620864 8098 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
NEDD4P46934 CREM-203ENST00000344351 1625 ntTSL 2 BASIC7.2□□□□□ -1.26
NEDD4P46934 AL117339.4-201ENST00000608335 7063 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NEDD4P46934 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NEDD4P46934 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC7.19□□□□□ -1.26
NEDD4P46934 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.19□□□□□ -1.26
NEDD4P46934 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEDD4P46934 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
NEDD4P46934 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEDD4P46934 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC7.19□□□□□ -1.26
NEDD4P46934 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEDD4P46934 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEDD4P46934 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC7.19□□□□□ -1.26
NEDD4P46934 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC7.19□□□□□ -1.26
NEDD4P46934 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC7.19□□□□□ -1.26
NEDD4P46934 COX6B1P3-201ENST00000312310 260 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 CRP-204ENST00000368112 787 ntTSL 2 BASIC7.19□□□□□ -1.26
NEDD4P46934 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEDD4P46934 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NEDD4P46934 RN7SKP240-201ENST00000410583 375 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC7.19□□□□□ -1.26
NEDD4P46934 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.19□□□□□ -1.26
NEDD4P46934 MTND4LP17-201ENST00000414607 293 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC7.19□□□□□ -1.26
NEDD4P46934 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC7.19□□□□□ -1.26
NEDD4P46934 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC7.19□□□□□ -1.26
NEDD4P46934 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC7.19□□□□□ -1.26
NEDD4P46934 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC7.19□□□□□ -1.26
NEDD4P46934 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC7.19□□□□□ -1.26
NEDD4P46934 SUMO2P10-201ENST00000452006 288 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 OR52E7P-201ENST00000452394 933 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC7.19□□□□□ -1.26
NEDD4P46934 SLC25A51P1-201ENST00000468432 871 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 AC008945.1-201ENST00000505144 499 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC7.19□□□□□ -1.26
NEDD4P46934 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC7.19□□□□□ -1.26
NEDD4P46934 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC7.19□□□□□ -1.26
NEDD4P46934 MED21-206ENST00000546323 575 ntTSL 3 BASIC7.19□□□□□ -1.26
NEDD4P46934 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC7.19□□□□□ -1.26
NEDD4P46934 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC7.19□□□□□ -1.26
NEDD4P46934 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC7.19□□□□□ -1.26
NEDD4P46934 PRELID3BP3-201ENST00000584963 545 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 AL645933.2-201ENST00000606743 1207 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC7.19□□□□□ -1.26
NEDD4P46934 AL137246.2-201ENST00000613439 662 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
NEDD4P46934 HSPD1P9-201ENST00000420325 1636 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
NEDD4P46934 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC7.19□□□□□ -1.26
NEDD4P46934 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
NEDD4P46934 OR2AH1P-202ENST00000641232 2744 ntBASIC7.19□□□□□ -1.26
NEDD4P46934 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC7.19□□□□□ -1.26
NEDD4P46934 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
NEDD4P46934 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 AC093225.1-201ENST00000506867 1408 ntBASIC7.18□□□□□ -1.26
NEDD4P46934 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 ZNF28-201ENST00000339844 650 ntTSL 4 BASIC7.18□□□□□ -1.26
NEDD4P46934 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 RPA3-204ENST00000406109 434 ntTSL 3 BASIC7.18□□□□□ -1.26
NEDD4P46934 AL354890.1-201ENST00000413730 346 ntBASIC7.18□□□□□ -1.26
NEDD4P46934 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
NEDD4P46934 H3F3BP1-201ENST00000440551 403 ntBASIC7.18□□□□□ -1.26
NEDD4P46934 AC079922.1-201ENST00000443291 359 ntBASIC7.18□□□□□ -1.26
NEDD4P46934 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.18□□□□□ -1.26
NEDD4P46934 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD4P46934 AC068228.1-201ENST00000461723 211 ntBASIC7.18□□□□□ -1.26
NEDD4P46934 RPL36A-206ENST00000471855 399 ntTSL 3 BASIC7.18□□□□□ -1.26
NEDD4P46934 AL035690.1-201ENST00000490892 383 ntBASIC7.18□□□□□ -1.26
NEDD4P46934 RBBP4P1-201ENST00000502424 1276 ntBASIC7.18□□□□□ -1.26
NEDD4P46934 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC7.18□□□□□ -1.26
NEDD4P46934 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC7.18□□□□□ -1.26
NEDD4P46934 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC7.18□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms