Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC7.84□□□□□ -1.15
COL15A1P39059 SNORD95-201ENST00000579879 68 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 COX6CP7-201ENST00000597056 208 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC7.84□□□□□ -1.15
COL15A1P39059 AC087821.1-201ENST00000623639 567 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.84□□□□□ -1.15
COL15A1P39059 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.84□□□□□ -1.15
COL15A1P39059 VANGL1-202ENST00000355485 8691 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.84□□□□□ -1.15
COL15A1P39059 PYROXD1-201ENST00000240651 4055 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 LINC02086-202ENST00000492522 2091 ntTSL 5 BASIC7.84□□□□□ -1.15
COL15A1P39059 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC7.84□□□□□ -1.15
COL15A1P39059 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 AC092692.1-201ENST00000623625 2595 ntBASIC7.84□□□□□ -1.15
COL15A1P39059 EIF4G2-208ENST00000526148 4001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 PPP1R12B-216ENST00000608999 15248 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.15
COL15A1P39059 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC7.84□□□□□ -1.15
COL15A1P39059 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC7.84□□□□□ -1.16
COL15A1P39059 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC7.84□□□□□ -1.16
COL15A1P39059 SNORA43.1-201ENST00000364863 140 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 AC087380.1-202ENST00000415970 1163 ntTSL 2 BASIC7.84□□□□□ -1.16
COL15A1P39059 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC7.84□□□□□ -1.16
COL15A1P39059 AL136979.1-201ENST00000421645 1120 ntTSL 3 BASIC7.84□□□□□ -1.16
COL15A1P39059 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC7.84□□□□□ -1.16
COL15A1P39059 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.16
COL15A1P39059 SUMO2P3-201ENST00000438311 288 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 KRTAP8-2P-201ENST00000440620 186 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 AC009237.1-201ENST00000442127 744 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 AC064862.4-201ENST00000442180 334 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 GAPDHP23-201ENST00000444823 993 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 RPL36AP39-201ENST00000445859 318 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC7.84□□□□□ -1.16
COL15A1P39059 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC7.84□□□□□ -1.16
COL15A1P39059 SSX6-203ENST00000509958 336 ntTSL 3 BASIC7.84□□□□□ -1.16
COL15A1P39059 AC112191.2-201ENST00000522428 333 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC7.84□□□□□ -1.16
COL15A1P39059 AP000648.1-201ENST00000529682 397 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 AC092865.1-201ENST00000544395 1023 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 MIR3176-201ENST00000582210 90 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 AC027229.1-201ENST00000583887 253 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 AL031601.1-201ENST00000605702 394 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 AL353729.2-201ENST00000605859 1249 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 RN7SL787P-201ENST00000613000 284 ntBASIC7.84□□□□□ -1.16
COL15A1P39059 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.84□□□□□ -1.16
COL15A1P39059 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.84□□□□□ -1.16
COL15A1P39059 ERG-202ENST00000398897 4651 ntTSL 5 BASIC7.83□□□□□ -1.16
COL15A1P39059 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.83□□□□□ -1.16
COL15A1P39059 NACA-203ENST00000454682 6629 ntTSL 5 BASIC7.83□□□□□ -1.16
COL15A1P39059 AC005034.3-201ENST00000604845 1747 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.83□□□□□ -1.16
COL15A1P39059 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.83□□□□□ -1.16
COL15A1P39059 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC7.83□□□□□ -1.16
COL15A1P39059 TNPO1P2-201ENST00000426249 2665 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL15A1P39059 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL15A1P39059 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.83□□□□□ -1.16
COL15A1P39059 AC011504.1-201ENST00000623331 4103 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 SHQ1P1-201ENST00000437111 1544 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 GUCY1B2-204ENST00000531898 1979 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 CPEB4-201ENST00000265085 9483 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL15A1P39059 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC7.83□□□□□ -1.16
COL15A1P39059 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL15A1P39059 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC7.83□□□□□ -1.16
COL15A1P39059 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC7.83□□□□□ -1.16
COL15A1P39059 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL15A1P39059 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL15A1P39059 OR11H13P-201ENST00000359695 979 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL15A1P39059 AL445238.1-204ENST00000400311 463 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 AC245060.4-201ENST00000413293 1121 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 AC068535.1-201ENST00000416008 471 ntTSL 3 BASIC7.83□□□□□ -1.16
COL15A1P39059 GTF3AP1-201ENST00000416942 1004 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 MARK2P12-201ENST00000420129 585 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 TRIM60P16-201ENST00000444048 694 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC7.83□□□□□ -1.16
COL15A1P39059 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7.83□□□□□ -1.16
COL15A1P39059 AC092865.4-201ENST00000477936 615 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 AC111000.5-201ENST00000506559 1178 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 RN7SKP98-201ENST00000517070 156 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 IGHV1-14-201ENST00000523391 241 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC7.83□□□□□ -1.16
COL15A1P39059 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC7.83□□□□□ -1.16
COL15A1P39059 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC7.83□□□□□ -1.16
COL15A1P39059 AC005244.1-201ENST00000582566 339 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL15A1P39059 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.83□□□□□ -1.16
COL15A1P39059 AL645933.2-201ENST00000606743 1207 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 TCL6_3.1-201ENST00000619064 137 ntBASIC7.83□□□□□ -1.16
COL15A1P39059 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC7.83□□□□□ -1.16
COL15A1P39059 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.83□□□□□ -1.16
COL15A1P39059 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC7.83□□□□□ -1.16
COL15A1P39059 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC7.82□□□□□ -1.16
COL15A1P39059 NBPF14-209ENST00000620240 2656 ntTSL 5 BASIC7.82□□□□□ -1.16
COL15A1P39059 USP32-214ENST00000592339 4045 ntTSL 1 (best) BASIC7.82□□□□□ -1.16
COL15A1P39059 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC7.82□□□□□ -1.16
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms