Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 GAPDHP59-201ENST00000435908 267 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 OR3D1P-201ENST00000438288 955 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 AC079922.1-201ENST00000443291 359 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCLP35914 AL358074.1-201ENST00000444800 509 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGCLP35914 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCLP35914 AL022319.1-201ENST00000458183 1167 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 AC112484.3-201ENST00000505910 329 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.19□□□□□ -1.42
HMGCLP35914 HMGN1P17-201ENST00000513734 295 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 Y_RNA.710-201ENST00000516975 110 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCLP35914 OR4A40P-201ENST00000533878 948 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGCLP35914 AC092865.1-201ENST00000544395 1023 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCLP35914 OR1E3-201ENST00000575608 948 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 MIR4701-201ENST00000583094 63 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCLP35914 AC097641.3-201ENST00000613523 464 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 AC009120.7-201ENST00000623452 780 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.19□□□□□ -1.42
HMGCLP35914 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
HMGCLP35914 AC011504.1-201ENST00000623331 4103 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
HMGCLP35914 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 AC090181.3-201ENST00000624777 1514 ntBASIC6.19□□□□□ -1.42
HMGCLP35914 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.19□□□□□ -1.42
HMGCLP35914 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
HMGCLP35914 PPBPP2-201ENST00000513150 1362 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 AL033543.1-201ENST00000623440 13454 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 AC019080.1-201ENST00000397057 5202 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCLP35914 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGCLP35914 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCLP35914 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HMGCLP35914 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCLP35914 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCLP35914 RN7SKP171-201ENST00000364417 303 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 LCN1P2-201ENST00000372030 223 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCLP35914 RBBP4P5-201ENST00000398583 1266 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 RPS17P17-201ENST00000419392 409 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 AC108479.1-201ENST00000431142 427 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 AC010240.2-201ENST00000445363 1205 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGCLP35914 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.18□□□□□ -1.42
HMGCLP35914 AC091874.2-201ENST00000505889 720 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGCLP35914 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.18□□□□□ -1.42
HMGCLP35914 RNA5SP434-201ENST00000516647 121 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 RNA5SP441-201ENST00000516809 88 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGCLP35914 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.18□□□□□ -1.42
HMGCLP35914 AC002519.2-203ENST00000567043 837 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGCLP35914 AC004232.2-201ENST00000574245 821 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.18□□□□□ -1.42
HMGCLP35914 AC008555.7-201ENST00000605008 583 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 AL357140.4-201ENST00000636827 412 ntBASIC6.18□□□□□ -1.42
HMGCLP35914 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HMGCLP35914 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HMGCLP35914 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.18□□□□□ -1.42
HMGCLP35914 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCLP35914 LINC01013-205ENST00000458028 1345 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCLP35914 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCLP35914 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HMGCLP35914 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
HMGCLP35914 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC6.18□□□□□ -1.42
HMGCLP35914 HEMK1-203ENST00000434410 17064 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HMGCLP35914 DNAH2-201ENST00000389173 13505 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HMGCLP35914 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCLP35914 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 NSF-206ENST00000575068 2667 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCLP35914 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HMGCLP35914 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCLP35914 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 AP000432.2-201ENST00000624164 2048 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 USP9YP3-201ENST00000434481 1766 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCLP35914 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HMGCLP35914 AC000058.1-201ENST00000415249 536 ntTSL 4 BASIC6.17□□□□□ -1.42
HMGCLP35914 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCLP35914 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.17□□□□□ -1.42
HMGCLP35914 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCLP35914 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.17□□□□□ -1.42
HMGCLP35914 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.17□□□□□ -1.42
HMGCLP35914 RPSAP65-201ENST00000429660 595 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 H3F3BP1-201ENST00000440551 403 ntBASIC6.17□□□□□ -1.42
HMGCLP35914 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.17□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.3 ms