Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 ZNF329-203ENST00000597186 3930 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
SLC6A4P31645 NEK2P2-201ENST00000438441 1338 ntBASIC6.69□□□□□ -1.34
SLC6A4P31645 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 SYNE2-216ENST00000555002 11532 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC6.69□□□□□ -1.34
SLC6A4P31645 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.69□□□□□ -1.34
SLC6A4P31645 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC6.68□□□□□ -1.34
SLC6A4P31645 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 AC107980.1-201ENST00000558671 3355 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC6.68□□□□□ -1.34
SLC6A4P31645 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 MAPK10-344ENST00000641718 3746 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 RNU1-24P-201ENST00000364285 165 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
SLC6A4P31645 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.68□□□□□ -1.34
SLC6A4P31645 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.68□□□□□ -1.34
SLC6A4P31645 RN7SKP281-201ENST00000410472 352 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC6.68□□□□□ -1.34
SLC6A4P31645 NPM1P36-201ENST00000415681 835 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC6.68□□□□□ -1.34
SLC6A4P31645 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.68□□□□□ -1.34
SLC6A4P31645 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC6.68□□□□□ -1.34
SLC6A4P31645 AL353768.1-201ENST00000439872 487 ntTSL 3 BASIC6.68□□□□□ -1.34
SLC6A4P31645 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.68□□□□□ -1.34
SLC6A4P31645 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC6.68□□□□□ -1.34
SLC6A4P31645 H3F3AP5-201ENST00000475267 429 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 GM2AP2-201ENST00000491764 562 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 OR2A3P-201ENST00000493774 953 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.68□□□□□ -1.34
SLC6A4P31645 RPEP1-201ENST00000504507 658 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 APOBEC3AP1-201ENST00000511396 287 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 AC034244.2-201ENST00000514668 858 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.68□□□□□ -1.34
SLC6A4P31645 IGLV3-6-201ENST00000523937 250 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.68□□□□□ -1.34
SLC6A4P31645 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.68□□□□□ -1.34
SLC6A4P31645 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.68□□□□□ -1.34
SLC6A4P31645 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.68□□□□□ -1.34
SLC6A4P31645 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC6.68□□□□□ -1.34
SLC6A4P31645 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC6.68□□□□□ -1.34
SLC6A4P31645 OR1E3-201ENST00000575608 948 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 AC026898.1-201ENST00000586404 571 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.68□□□□□ -1.34
SLC6A4P31645 VN1R81P-201ENST00000602085 372 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 AC020765.1-201ENST00000604296 328 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 AP003485.1-201ENST00000625093 753 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.68□□□□□ -1.34
SLC6A4P31645 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 AXDND1-214ENST00000617277 3405 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
SLC6A4P31645 SMG1P5-202ENST00000529428 4219 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 SMG1P2-201ENST00000566127 4221 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.68□□□□□ -1.34
SLC6A4P31645 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.68□□□□□ -1.34
SLC6A4P31645 AL359694.2-201ENST00000567753 1615 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 SAGE3P-201ENST00000619800 1635 ntBASIC6.68□□□□□ -1.34
SLC6A4P31645 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.68□□□□□ -1.34
SLC6A4P31645 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 MCCC1-210ENST00000492597 2774 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 NLRC4-202ENST00000360906 3359 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
SLC6A4P31645 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SLC6A4P31645 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SLC6A4P31645 TGFB2-202ENST00000366930 4969 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SLC6A4P31645 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SLC6A4P31645 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SLC6A4P31645 AL353743.3-201ENST00000442109 1468 ntBASIC6.67□□□□□ -1.34
SLC6A4P31645 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.67□□□□□ -1.34
SLC6A4P31645 PIGN-207ENST00000586566 3891 ntTSL 5 BASIC6.67□□□□□ -1.34
SLC6A4P31645 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SLC6A4P31645 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SLC6A4P31645 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SLC6A4P31645 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.67□□□□□ -1.34
SLC6A4P31645 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SLC6A4P31645 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SLC6A4P31645 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC6.67□□□□□ -1.34
SLC6A4P31645 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SLC6A4P31645 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SLC6A4P31645 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.67□□□□□ -1.34
SLC6A4P31645 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SLC6A4P31645 RPL11P4-201ENST00000332269 436 ntBASIC6.67□□□□□ -1.34
SLC6A4P31645 CXADRP1-201ENST00000398098 1095 ntBASIC6.67□□□□□ -1.34
SLC6A4P31645 AL391419.1-201ENST00000398901 1275 ntBASIC6.67□□□□□ -1.34
SLC6A4P31645 AL356057.1-202ENST00000402263 756 ntBASIC6.67□□□□□ -1.34
SLC6A4P31645 VN1R12P-201ENST00000403778 876 ntBASIC6.67□□□□□ -1.34
SLC6A4P31645 ALDH7A1P4-201ENST00000412255 178 ntBASIC6.67□□□□□ -1.34
SLC6A4P31645 AL138831.1-201ENST00000415144 209 ntTSL 3 BASIC6.67□□□□□ -1.34
SLC6A4P31645 MTCO2P17-201ENST00000424336 677 ntBASIC6.67□□□□□ -1.34
SLC6A4P31645 AL139415.1-201ENST00000424862 352 ntBASIC6.67□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms