Protein–RNA interactions for Protein: P23469

PTPRE, Receptor-type tyrosine-protein phosphatase epsilon, humanhuman

Predictions only

Length 700 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPREP23469 RPL26P29-201ENST00000415623 438 ntBASIC9.36□□□□□ -0.91
PTPREP23469 AL050320.1-201ENST00000420044 446 ntTSL 2 BASIC9.36□□□□□ -0.91
PTPREP23469 RBM22P7-201ENST00000421321 280 ntBASIC9.36□□□□□ -0.91
PTPREP23469 RPL31P54-201ENST00000429803 370 ntBASIC9.36□□□□□ -0.91
PTPREP23469 AC012506.4-202ENST00000430051 572 ntTSL 5 BASIC9.36□□□□□ -0.91
PTPREP23469 AC005189.1-201ENST00000431286 310 ntBASIC9.36□□□□□ -0.91
PTPREP23469 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC9.36□□□□□ -0.91
PTPREP23469 FMO7P-201ENST00000436045 768 ntBASIC9.36□□□□□ -0.91
PTPREP23469 LINC01185-201ENST00000439412 554 ntTSL 4 BASIC9.36□□□□□ -0.91
PTPREP23469 AL627224.1-201ENST00000448334 444 ntBASIC9.36□□□□□ -0.91
PTPREP23469 RPL7P14-201ENST00000449851 741 ntBASIC9.36□□□□□ -0.91
PTPREP23469 FGF14-AS1-202ENST00000451630 321 ntTSL 2 BASIC9.36□□□□□ -0.91
PTPREP23469 BX890604.1-206ENST00000471090 922 ntTSL 3 BASIC9.36□□□□□ -0.91
PTPREP23469 PA2G4P4-201ENST00000473864 1182 ntBASIC9.36□□□□□ -0.91
PTPREP23469 RN7SL869P-201ENST00000497032 300 ntBASIC9.36□□□□□ -0.91
PTPREP23469 CCDC34P1-201ENST00000507441 517 ntBASIC9.36□□□□□ -0.91
PTPREP23469 LINC02121-201ENST00000507950 432 ntTSL 2 BASIC9.36□□□□□ -0.91
PTPREP23469 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC9.36□□□□□ -0.91
PTPREP23469 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC9.36□□□□□ -0.91
PTPREP23469 AC097460.2-201ENST00000511857 741 ntBASIC9.36□□□□□ -0.91
PTPREP23469 NTAN1P2-201ENST00000515730 940 ntBASIC9.36□□□□□ -0.91
PTPREP23469 NPM1P52-201ENST00000518264 846 ntBASIC9.36□□□□□ -0.91
PTPREP23469 IGHVIII-82-201ENST00000522058 250 ntBASIC9.36□□□□□ -0.91
PTPREP23469 AC013701.1-201ENST00000522657 465 ntBASIC9.36□□□□□ -0.91
PTPREP23469 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC9.36□□□□□ -0.91
PTPREP23469 KLRF2-201ENST00000535540 731 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PTPREP23469 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC9.36□□□□□ -0.91
PTPREP23469 PDCD5P1-201ENST00000543528 309 ntBASIC9.36□□□□□ -0.91
PTPREP23469 AC117498.2-202ENST00000549864 473 ntTSL 2 BASIC9.36□□□□□ -0.91
PTPREP23469 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC9.36□□□□□ -0.91
PTPREP23469 GTF2IP22-201ENST00000554443 182 ntBASIC9.36□□□□□ -0.91
PTPREP23469 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC9.36□□□□□ -0.91
PTPREP23469 APEX1-214ENST00000557054 888 ntTSL 5 BASIC9.36□□□□□ -0.91
PTPREP23469 AC133485.3-201ENST00000562604 262 ntTSL 5 BASIC9.36□□□□□ -0.91
PTPREP23469 AC138907.3-201ENST00000563937 262 ntTSL 3 BASIC9.36□□□□□ -0.91
PTPREP23469 AC138869.2-201ENST00000569850 262 ntTSL 3 BASIC9.36□□□□□ -0.91
PTPREP23469 RN7SL786P-201ENST00000579130 298 ntBASIC9.36□□□□□ -0.91
PTPREP23469 AP001120.4-201ENST00000590231 108 ntBASIC9.36□□□□□ -0.91
PTPREP23469 RPL23AP90-201ENST00000603820 236 ntBASIC9.36□□□□□ -0.91
PTPREP23469 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC9.36□□□□□ -0.91
PTPREP23469 MESTIT1_2.1-201ENST00000616328 235 ntBASIC9.36□□□□□ -0.91
PTPREP23469 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC9.36□□□□□ -0.91
PTPREP23469 CTNNA2-217ENST00000540488 2792 ntTSL 5 BASIC9.36□□□□□ -0.91
PTPREP23469 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PTPREP23469 AC108099.1-201ENST00000564402 3258 ntBASIC9.36□□□□□ -0.91
PTPREP23469 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PTPREP23469 FMN2-206ENST00000543681 2902 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PTPREP23469 ABHD3-205ENST00000578270 2080 ntTSL 5 BASIC9.36□□□□□ -0.91
PTPREP23469 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC9.36□□□□□ -0.91
PTPREP23469 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC9.36□□□□□ -0.91
PTPREP23469 AC105342.1-201ENST00000378334 6848 ntBASIC9.36□□□□□ -0.91
PTPREP23469 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC9.36□□□□□ -0.91
PTPREP23469 AC079097.1-201ENST00000512187 1399 ntBASIC9.36□□□□□ -0.91
PTPREP23469 AL136146.1-201ENST00000529830 1667 ntBASIC9.36□□□□□ -0.91
PTPREP23469 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC9.36□□□□□ -0.91
PTPREP23469 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 MRAS-211ENST00000621127 3801 ntTSL 5 BASIC9.35□□□□□ -0.91
PTPREP23469 PDIK1L-201ENST00000374269 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 NEK10-201ENST00000295720 2871 ntTSL 2 BASIC9.35□□□□□ -0.91
PTPREP23469 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC9.35□□□□□ -0.91
PTPREP23469 HEATR4-201ENST00000334988 3469 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 FOXM1-201ENST00000342628 3475 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 CDK15-203ENST00000434439 2240 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 VPS8-204ENST00000424463 2359 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 BMX-202ENST00000348343 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 COL6A6-201ENST00000358511 9581 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
PTPREP23469 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
PTPREP23469 GBP7-201ENST00000294671 2454 ntAPPRIS P1 TSL 2 BASIC9.35□□□□□ -0.91
PTPREP23469 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC9.35□□□□□ -0.91
PTPREP23469 FANK1-201ENST00000368689 522 ntTSL 3 BASIC9.35□□□□□ -0.91
PTPREP23469 FCAR-205ENST00000391723 754 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 CCNYL3-201ENST00000407030 998 ntBASIC9.35□□□□□ -0.91
PTPREP23469 RPS26P38-201ENST00000414476 348 ntBASIC9.35□□□□□ -0.91
PTPREP23469 HMGB3P23-201ENST00000414981 585 ntBASIC9.35□□□□□ -0.91
PTPREP23469 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 SAR1AP4-201ENST00000429225 591 ntBASIC9.35□□□□□ -0.91
PTPREP23469 AL121885.2-201ENST00000440255 819 ntTSL 3 BASIC9.35□□□□□ -0.91
PTPREP23469 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC9.35□□□□□ -0.91
PTPREP23469 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC9.35□□□□□ -0.91
PTPREP23469 AC010878.1-201ENST00000456500 1047 ntBASIC9.35□□□□□ -0.91
PTPREP23469 AC013787.1-201ENST00000460165 307 ntBASIC9.35□□□□□ -0.91
PTPREP23469 RN7SL213P-201ENST00000463482 317 ntBASIC9.35□□□□□ -0.91
PTPREP23469 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC9.35□□□□□ -0.91
PTPREP23469 LSAMP-AS1-201ENST00000490351 553 ntTSL 2 BASIC9.35□□□□□ -0.91
PTPREP23469 AC127024.1-201ENST00000490847 418 ntBASIC9.35□□□□□ -0.91
PTPREP23469 AL449212.1-201ENST00000499853 517 ntBASIC9.35□□□□□ -0.91
PTPREP23469 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC9.35□□□□□ -0.91
PTPREP23469 MIR2052HG-204ENST00000523442 550 ntTSL 4 BASIC9.35□□□□□ -0.91
PTPREP23469 AC087521.3-201ENST00000528226 553 ntTSL 4 BASIC9.35□□□□□ -0.91
PTPREP23469 AP000880.1-201ENST00000529416 743 ntTSL 3 BASIC9.35□□□□□ -0.91
PTPREP23469 ZNF705CP-201ENST00000530515 889 ntBASIC9.35□□□□□ -0.91
PTPREP23469 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC9.35□□□□□ -0.91
PTPREP23469 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.91
PTPREP23469 NR2F2-AS1-208ENST00000560395 441 ntTSL 5 BASIC9.35□□□□□ -0.91
PTPREP23469 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC9.35□□□□□ -0.91
PTPREP23469 MIR5705-201ENST00000579870 89 ntBASIC9.35□□□□□ -0.91
PTPREP23469 AC006504.6-201ENST00000590142 199 ntBASIC9.35□□□□□ -0.91
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms