Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 RN7SL657P-201ENST00000582431 293 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 AP001357.1-201ENST00000586304 1053 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 AC015849.6-201ENST00000605454 474 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 AC093388.1-201ENST00000609166 430 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 AC005899.7-201ENST00000618199 588 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 MIR7159-201ENST00000620587 66 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 MAPK10-350ENST00000641777 965 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
MT-ND1P03886 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 AL161901.1-201ENST00000624954 3425 ntBASIC5.79□□□□□ -1.48
MT-ND1P03886 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.79□□□□□ -1.48
MT-ND1P03886 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
MT-ND1P03886 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.79□□□□□ -1.48
MT-ND1P03886 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
MT-ND1P03886 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
MT-ND1P03886 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.78□□□□□ -1.48
MT-ND1P03886 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
MT-ND1P03886 TOPORSLP1-201ENST00000467693 2102 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
MT-ND1P03886 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
MT-ND1P03886 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 RNA5SP308-201ENST00000362532 115 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 AC012358.1-201ENST00000366153 916 ntTSL 3 BASIC5.78□□□□□ -1.48
MT-ND1P03886 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MT-ND1P03886 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.78□□□□□ -1.48
MT-ND1P03886 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.78□□□□□ -1.48
MT-ND1P03886 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.78□□□□□ -1.48
MT-ND1P03886 AC083862.1-201ENST00000427378 1242 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC5.78□□□□□ -1.48
MT-ND1P03886 AC083855.1-201ENST00000440041 258 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.78□□□□□ -1.48
MT-ND1P03886 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.78□□□□□ -1.48
MT-ND1P03886 PPP1R11P1-201ENST00000486095 376 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 RN7SL714P-201ENST00000487050 298 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 IQCH-203ENST00000512104 1000 ntTSL 2 BASIC5.78□□□□□ -1.48
MT-ND1P03886 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC5.78□□□□□ -1.48
MT-ND1P03886 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.78□□□□□ -1.48
MT-ND1P03886 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.78□□□□□ -1.48
MT-ND1P03886 RPL3P13-201ENST00000550415 216 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.78□□□□□ -1.48
MT-ND1P03886 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC5.78□□□□□ -1.48
MT-ND1P03886 AC023968.1-201ENST00000560719 475 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 OR4C49P-201ENST00000563891 900 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 AC133552.4-201ENST00000576103 676 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.78□□□□□ -1.48
MT-ND1P03886 SYPL1P2-201ENST00000582878 727 ntBASIC5.78□□□□□ -1.48
MT-ND1P03886 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC5.78□□□□□ -1.48
MT-ND1P03886 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.78□□□□□ -1.48
MT-ND1P03886 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
MT-ND1P03886 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.78□□□□□ -1.48
MT-ND1P03886 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
MT-ND1P03886 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.78□□□□□ -1.48
MT-ND1P03886 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
MT-ND1P03886 AC012078.1-201ENST00000405035 1646 ntBASIC5.77□□□□□ -1.48
MT-ND1P03886 TCF7L2-222ENST00000627217 3680 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MT-ND1P03886 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AC022306.1-201ENST00000560489 1562 ntBASIC5.77□□□□□ -1.49
MT-ND1P03886 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MT-ND1P03886 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.77□□□□□ -1.49
MT-ND1P03886 OR8H3-201ENST00000313472 939 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
MT-ND1P03886 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MT-ND1P03886 RN7SKP205-201ENST00000410999 307 ntBASIC5.77□□□□□ -1.49
MT-ND1P03886 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AC092646.1-201ENST00000427142 901 ntBASIC5.77□□□□□ -1.49
MT-ND1P03886 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
MT-ND1P03886 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AL138767.3-201ENST00000438082 495 ntTSL 3 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC5.77□□□□□ -1.49
MT-ND1P03886 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.77□□□□□ -1.49
MT-ND1P03886 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC5.77□□□□□ -1.49
MT-ND1P03886 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
MT-ND1P03886 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.77□□□□□ -1.49
MT-ND1P03886 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.77□□□□□ -1.49
MT-ND1P03886 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC5.77□□□□□ -1.49
MT-ND1P03886 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms